| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3638 |
|---|
| Symbol | |
|---|
| ID | 4254202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4350168 |
|---|
| End bp | 4350524 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638120281 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_735759 |
|---|
| Protein GI | 113971966 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATTA CCCGTTTAGA TGTTGGTACA CGTATGAGCA GCATAGTGAT CCACCAAGGC
ACAGTGTACT TATGTGGCCA AGTGGCGAAG GATAAGTATC AAAACATCAC CGAACAAACG
ACGACTATGC TAGAGGAAGT CGACACTCTG TTAGCACAGG CGGGCAGTTC TCGGGAACAC
TTGTTGTCAG CCACTATCTA TCTTAAGGAT ATGAATGACT ACGATGCCAT GAATACCGTT
TGGGATGCTT GGGTGCCACA GGGTCATGCG CCAGCCCGTG CCTGTGTGCA GGCGGCCATT
GCCGAGCCAG AATATCTGGT TGAAGTTTCT GTGATTGCCG CCGTCGTTAA GGCGTAA
|
|---|
| Protein sequence | MSITRLDVGT RMSSIVIHQG TVYLCGQVAK DKYQNITEQT TTMLEEVDTL LAQAGSSREH
LLSATIYLKD MNDYDAMNTV WDAWVPQGHA PARACVQAAI AEPEYLVEVS VIAAVVKA
|
|---|
| |