Gene Shewmr4_3449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3449 
Symbol 
ID4254015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4123778 
End bp4124563 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content46% 
IMG OID638120087 
Productmethyltransferase type 11 
Protein accessionYP_735572 
Protein GI113971779 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTA ACGCGCTTTA TACCGATCTC TCCGGTTATT ACGATCTCAT GTGCTCCGAT 
ATCAACTATC AACAACAGAG TGCGAGCATC CATCGATTGC ATCAGTTCTT AGGCAATAAT
GGCAAGCAAC ACCTAGATCT AGCCTGTGGC ACTGGCCCGC ATGTAAGGCA TTTTATCGAT
TTAGGTTATC AGTGTCGTGG TCTGGATATT AATCAACCCA TGCTCGATAT GGCTATGCGT
CGCTGCCCAG AAGCGCAGTT TAATCTACAG GATATGACCG CCTTTTATCT TGAGCAGCCA
GTCGATTTAA TTACCTGTTT TTTATATTCC ATTCATTACA GTGCGGGCAT CGAGCGCCTC
AAGAGTTGTA TTGCCAGCGT GCACCGCGCC CTGAATGACG GCGGGATATT TTGTTTTAAT
TCGGTTGATA AGCACCGCAT CGATAACCGC TTATCGATTA AGCATTTTGC CGAGTTTGAG
GGGCACCATT TTGCCTTTGA ATCTGGCTGG CATTACAGTG GTCAGGGCGA AAACCAGTCA
TTAAACCTGA GTATTGCAAA GAGTCTCCAG CCTTTTACTC AACAGGCTGA TTTCGAAGGC
GATACATCTG CGCATCAGAC TGAGTTATGG CAAGACCAAC ACACTATGGT CGCGACCAGT
TTTGCGGAGC TGCAAGCCTT ACTCGCGCCA TATTTTGAAG TGCATATCTT TGAACACGAT
TATGAAAAAA TCGTCCCATG GGATTTAAGC TCAGGTAATG CGCTGTTTGT CTGTGTGAAG
ATTTAA
 
Protein sequence
MSSNALYTDL SGYYDLMCSD INYQQQSASI HRLHQFLGNN GKQHLDLACG TGPHVRHFID 
LGYQCRGLDI NQPMLDMAMR RCPEAQFNLQ DMTAFYLEQP VDLITCFLYS IHYSAGIERL
KSCIASVHRA LNDGGIFCFN SVDKHRIDNR LSIKHFAEFE GHHFAFESGW HYSGQGENQS
LNLSIAKSLQ PFTQQADFEG DTSAHQTELW QDQHTMVATS FAELQALLAP YFEVHIFEHD
YEKIVPWDLS SGNALFVCVK I