| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2778 |
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| Symbol | |
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| ID | 4253349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3325040 |
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| End bp | 3327697 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638119413 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_734906 |
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| Protein GI | 113971113 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.223386 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGTTAA AAGACTACCA AAATGGTGTG CTGGATAAAC TGGACTATTA CCTGAAAAAG
CTGGCCGACA CCAAGGAAGA GGCGGAAGAC TTTGTTGCTT TTCAGAAAAT GAAAGGCAAA
GAGGCTCGCT TAACCGATTA CGCCAAAGAT ACGTGGGAAG CTCTGGTACA GGAGCGCCGT
ATTGACCTAC TTAAAGACAA AAGCGGTCAC TTGGTGCCTG CTCCTTATGT CACAAGATTT
GACGGCTTAG AGAGGCCAAT CCCTAACGTG TGCCTGAAAG TACCGACAGG TGGTGGTAAA
ACCTTACTTG GTGTTGCTGC GGTTGAGCGC CTGCAAACGG ATTTGTTTAC GCAACAGACA
GGTATGGTGC TCTGGGTAGT GCCGTCGGAT GCCATTTACA AACAAACCTG GAAACAGTTG
GCAAATCGTG AGCATCCGTA TCGTCAAATG TTAGAGCGAG CTTCGGGTGG GCGCGTCAAA
ATGCTTGAAA AGAACGATGC CTTTACCAAG CGAGATACCG ACGAAAACCT GTGCGTTATG
CTGTTGATGC TGCAATCCAG TGCGCGCCAA TCCAAAGAAA CCCTGCGCAT GTTCCGCGAT
AGCGGGCGAT TTACTACCTT CTTCCCGATT GAAGATGACA CCATAGCCAA TGAAGCGCTC
TTGAGCAGTA TTCGCAATTT AGATTGCAAC GATCTTTCCG ATTACGGTTG GCAAGAAGGC
ATAATCCCAG GCTCAGTGTC AGTCAAACAA AGCTTAGGCA ATGTGTTACG CATGGTTCGC
CCAGTGATTA TTGTGGATGA GGGGCATAAA GCCTATAGCG AAACCGCAAG AGAAACCCTG
TGTGGCTTTA ACCCTAAGTT TATTCTTGAG CTCTCGGCCA CGCCTAACGC TAACGGTAAG
CATCACTCAA ATGTGTTGGT GAATGTGTCA GGGCAAGCGT TGAAAGATGA ACAAATGATT
AAGTTGCCCA TCAACTTAAT CAACGAAGAC AAAAGTGACT GGAAGCATAG CTTGTCGCTT
GCGCACGCTA AATTGGCAGA GCTTGAACAG GATGCCGGGC TGCTACAAAA CGAAACCGGT
CGCTATATTC GGCCCATTAT GCTGATCCGT GTTGAGCGCA CAGGTAAAGA CCAACGAGAT
TCAGCCTTTG TACATGCGGA AGACGCCCGT GAGTATTTGA TGGAAAAACT GGGCGTGAAT
GAAAATGAAA TTCGCCTGAA AACGTCTGAT AAAGACGAGT TGGGTGATGA TGATTTGCTC
AGCGAAATGT GCCCCGTTAA ATACATCATC ACAAAGGATG CGCTGCGTGA AGGTTGGGAT
TGCCCCTTTG CTTATGTGTT AACCGTGTTG TCTAAAATGA CCGCAAAAAC GGCAATCACC
CAAATGATTG GCCGGGTACT ACGTCAACCA CATGCGCGAT TGACGCAAAA ACCAAGTTTA
GATGAGTGTT ATGTCTACAC CTTTGATCAG GATGTGATGG AAGCCGTCGC CGGTGTTAAG
CAAGGTTTAG AAGAAGAAGG AATGGGTGAT GTGGCGAATC AGGTTAAAGC CTCAGAAGCC
AATAAGCCCG CCGCAGTGGC AAGCAAAGAA ACCTTATTGC GTAGAGAGCG TTTTCGTAAC
CTACCTAAAA TATTCTTGCC TCGGGTTTTA CATCGCGATG CTGGGTACAA AGACGGCTTC
CGCTTGTTTG ACTATGAACG TGATGTGTTG GGTGACCTAG ATTGGGAGTC GCTGTCTTAT
TTGAATGCAG GGAATTTCCA GTTAGTGGAC GATAAGTTAA AGCGCACGAT TGCCCGTATC
GACTACAAAA TGTCTAAGGA TAACCAAGGC GAATTGGACT TGGCCGATCC GGTTCACGAA
AATATCGAGT TTGACCCCAA TGCAGGCCTG GATATCTCGT TTATGGTAAG GCAGCTCACC
GATGTTATTC CAAACCCATG GCAAGCCATG CGGGTATTAA CGCACACGTT AGACATCTTG
CGTGGTAATG GCGTTTCTGA GGAGGCTTTG TTTAATAACC GCCTTGAGCT ACTCAAAGAG
ATGAAACGCG ACATTAAACA ACAGGTCGCG CAATTATCGG AGCAAATCTT CAGATCTAAG
TTGGACAAGG GTGATATTTC CCTGCGCCTA CTAGCTTCAG ATAACGAAAA GCTAAATTGG
GAACTGGCGC AAACCTTAGA GGTTAATGTC AGTGAGCATG ATCAGGTGCT TCGCCGCAAG
GATAGTTCTG AACTCGAAAA AAGCCTGTTC GAAAAGGTCT ATCAAAATGG GCTGAACAAT
TTAGAGCGCG ACACAGCCTG GTATTTGGAT AAGCAAGAGT CTGTGTATTG GTGGCATCGT
ATTGCAGTGA ATCAACGCGA GTACAGCCTG CAAGGCTGGC AAAAGCAAAA GGTTTACCCT
GACTTGTTGG TGTGCGTCGA AAAGCCAAAC TCTGGTAGTT ACCGCTTCTC TGTACTGGAA
ACCAAGGGTG AGCATTTAAA AGGAAACGAT GACACTGAGT ACAAGCGCCG ATTGTTTGAG
CTGTTTACTG AGCACGTCAA GACGGCAGTA GATGCTGGCG AACTTAAGTT GGAAGCAGCG
TCGGGTGGTA TGTCGTTCAG AATGCTGATG GAAGACAGTT GGTCACAGGA AATCGTGCCT
GAGCTCGTGA CTAACTAA
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| Protein sequence | MELKDYQNGV LDKLDYYLKK LADTKEEAED FVAFQKMKGK EARLTDYAKD TWEALVQERR
IDLLKDKSGH LVPAPYVTRF DGLERPIPNV CLKVPTGGGK TLLGVAAVER LQTDLFTQQT
GMVLWVVPSD AIYKQTWKQL ANREHPYRQM LERASGGRVK MLEKNDAFTK RDTDENLCVM
LLMLQSSARQ SKETLRMFRD SGRFTTFFPI EDDTIANEAL LSSIRNLDCN DLSDYGWQEG
IIPGSVSVKQ SLGNVLRMVR PVIIVDEGHK AYSETARETL CGFNPKFILE LSATPNANGK
HHSNVLVNVS GQALKDEQMI KLPINLINED KSDWKHSLSL AHAKLAELEQ DAGLLQNETG
RYIRPIMLIR VERTGKDQRD SAFVHAEDAR EYLMEKLGVN ENEIRLKTSD KDELGDDDLL
SEMCPVKYII TKDALREGWD CPFAYVLTVL SKMTAKTAIT QMIGRVLRQP HARLTQKPSL
DECYVYTFDQ DVMEAVAGVK QGLEEEGMGD VANQVKASEA NKPAAVASKE TLLRRERFRN
LPKIFLPRVL HRDAGYKDGF RLFDYERDVL GDLDWESLSY LNAGNFQLVD DKLKRTIARI
DYKMSKDNQG ELDLADPVHE NIEFDPNAGL DISFMVRQLT DVIPNPWQAM RVLTHTLDIL
RGNGVSEEAL FNNRLELLKE MKRDIKQQVA QLSEQIFRSK LDKGDISLRL LASDNEKLNW
ELAQTLEVNV SEHDQVLRRK DSSELEKSLF EKVYQNGLNN LERDTAWYLD KQESVYWWHR
IAVNQREYSL QGWQKQKVYP DLLVCVEKPN SGSYRFSVLE TKGEHLKGND DTEYKRRLFE
LFTEHVKTAV DAGELKLEAA SGGMSFRMLM EDSWSQEIVP ELVTN
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