Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2363 |
Symbol | |
ID | 4252934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 2818706 |
End bp | 2820478 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638118988 |
Product | type III restriction enzyme, res subunit |
Protein accession | YP_734491 |
Protein GI | 113970698 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0989425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0932294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGTTA ATTCCAGCCC GAGCGTTACC CTCAGGGATT ATCAGCAACA AGCCGTCGAT GCCGCCATCG CGCATTTTAA AAAAAGCACC GATTCCGCCG TGTTAGTCCT GCCAACGGGT GCCGGAAAAA GTATCGTTAT TGCCGAGCTG GCCCGCATCG CCAGAGGACG AGTGCTGGTT TTAACCCATG TGAAGGAACT GGTTGCCCAA AACGCGCAAA AGGTCGGATT ACTGACGACT GAGGCCAGCA TTTACTCCGC TGGGTTAAAT CAAAAATCGA CTGACGGCAA AACCGTCGTG GCCAGTATCC AATCCGCCGC GCGCGCCTTA ACTCAATTCG ATGAGCTCTT CTCGTTAGTG ATTATCGATG AGTGCCACAG AGTCAGCCTC GAAAAAACCA GCCAATATCA GCAACTCTTA AGTCATTTAC AAGAGCGTAA CCCCAAGCTC AAATTATTAG GCCTGACGGC CACTCCCTAT CGGCTCGGGA CAGGTTGGAT TTACAAACGC CACTACCACG GCAAAGTCGG CTCGCCTGAA CTTGGGATCT TCGAGCAGTG TATTTTCGAG CTCCCCATCC GTCCGCTGAT TAAACAAGGC TATTTAACCG CGCCCACTTT ATTTGATGGT TTAAGCGCCC AATATGACTT CAGCCAAATC AAGCCCAATG ACAATGGCGA ATATCCCGAA ACCCAAGTCA ATGCGCTGCT GAATCACGCA GGGCGAGCAA CAACGGCGAT TGTGAAGCAA CTGATTGAAC TGAGTCACCA TCGCCAAGGG ATCATTATTT TTGCGGCAAC AGTGCGCCAT GCTGAGGAAA TTGTCAGCCA GCTTAACAAG GAGCACGGCG AGCAAACGGC AATCGTCACG GCGCAAACGC CAGATAACGA ACGTGATGAA CTTATCGAGC GCTTTAAAGC GAGGGAGCTT AAGTTCCTTG TCAACGTGGC GGTATTGACC ACCGGATTCG ATGCGCCCCA TGTCGATTTG ATTGCGATTT TACGCCCCAC CGCATCGGTG AGTTTGTTTC AGCAAATGAT TGGCCGCGGT CTTAGGATCT GTGAAGGTAA AAAAGATTGT TTAGTGATTG ATTACGCTGC CAATGGCTAT GATTTGTATT TTCCTGAAGT CGGCCAAGCT AAGCCCAATA GCAAGTCGGT TCCGGTACAA GTGCACTGCC CTGTCTGCCA GTTTGCCAAT ATCTTTTGGG GATTAACCGA CAATGATGGC GATATTATCG AACACTTTGG CCGTCGCTGT CAGGGCATAG TCGAGCATCA TGGACAAAAG CAGCAATGTG ACTTTCGATT TAGATCTAAA TCCTGTCCAG ATTGCGGACA AGAGAACGAC ATAGCCGCGC GTATTTGCCA GCATTGCCAG TCGACCTTAA TCGACCCCGA TAAACGCCTT AAGCAAGTAT TGAATAAGCA ACACCATCAT CTGTTCCGCT GCCAGCATAT GACGTTAATG GATGATGCTG GCGATCTTAA GGTGCAATAT CTGGACATTG AAGGAAACGA GTTTAATCGA CGCTTTAAAC TGCAAACGCC CGCCCAATGG CGTGCCTTGT ATGCGCTATT TATTTTCCCC CATAGTCGCA CGCCGGGCCT AAAACCTAAG CAATACAAAA AAGTGTCTGA GCTGATTGCC GATAGCGCCG CTTTTCGGAT GCCAGATCTG TTACTGCTGA AAAAGCATAA AAAAGGCTGG GATCTGCTCG AAAGCTATTT CGATTACCAA GGGCGCTATC AAACTGAAAA TAAACACATC TGA
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Protein sequence | MSVNSSPSVT LRDYQQQAVD AAIAHFKKST DSAVLVLPTG AGKSIVIAEL ARIARGRVLV LTHVKELVAQ NAQKVGLLTT EASIYSAGLN QKSTDGKTVV ASIQSAARAL TQFDELFSLV IIDECHRVSL EKTSQYQQLL SHLQERNPKL KLLGLTATPY RLGTGWIYKR HYHGKVGSPE LGIFEQCIFE LPIRPLIKQG YLTAPTLFDG LSAQYDFSQI KPNDNGEYPE TQVNALLNHA GRATTAIVKQ LIELSHHRQG IIIFAATVRH AEEIVSQLNK EHGEQTAIVT AQTPDNERDE LIERFKAREL KFLVNVAVLT TGFDAPHVDL IAILRPTASV SLFQQMIGRG LRICEGKKDC LVIDYAANGY DLYFPEVGQA KPNSKSVPVQ VHCPVCQFAN IFWGLTDNDG DIIEHFGRRC QGIVEHHGQK QQCDFRFRSK SCPDCGQEND IAARICQHCQ STLIDPDKRL KQVLNKQHHH LFRCQHMTLM DDAGDLKVQY LDIEGNEFNR RFKLQTPAQW RALYALFIFP HSRTPGLKPK QYKKVSELIA DSAAFRMPDL LLLKKHKKGW DLLESYFDYQ GRYQTENKHI
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