| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2236 |
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| Symbol | |
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| ID | 4252808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2673696 |
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| End bp | 2674397 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638118861 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_734365 |
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| Protein GI | 113970572 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.918746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0175555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGGTT TGAAATATAA ATTTGCAATA TTTATATCAA TTTTTATTTT TTCATCAGTG
GAAGCTAGTG TTGTACTGGA TAATACAAGG ATAATATATA GATCAGATAA AGAAGAAGTT
AGTTTGAAGT TGACAAATAA AGGAAGTGAA CCATTTCTAG TTCAGAGTTG GATTGATAAT
GGCGAGCTTA ATTTAGATCC TTCCAATATT AAAGTTCCAT TTGTCATATC ACCTCCTATA
AACAAGATTA ATGCTGGCGA GGGACAGCAT TTGCGAATTT TTTACACAGG GGAAACTCTT
CCAGATAATA AAGAGTCTAT ATTTTGGTTA AACGTACTTT CGGTCCCCCC GAAGAATAAT
TCTAATGCTA ATAAGCTCCA ACTTGCATTT AAAACCAAGA TAAAACTATT TTTCAGACCT
ACCTCATTAG ATGGGTCAAC AAGTAGCGCT GTGGAAAAAA TAAAGTTGAG CAAGTTAGAA
AATGGAATGG AAATTAATAA TCCTACACCT TTTTTTATTA CTATTTTGAG TATATCTGCA
GTTGAAAGTG GTGATATTGA AAAAAAATTA ATAGAAAACA TAATGATTTC ACCATTTGAA
GTGTTGACTG TTTCAAGTGA ATATAATAGT TCTTTGGTTC ATAATATATC ATTCATAAAT
GACTATGGCG CGACAGAAAA ACAAAAAATT GTAGGTTTAT AA
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| Protein sequence | MNGLKYKFAI FISIFIFSSV EASVVLDNTR IIYRSDKEEV SLKLTNKGSE PFLVQSWIDN
GELNLDPSNI KVPFVISPPI NKINAGEGQH LRIFYTGETL PDNKESIFWL NVLSVPPKNN
SNANKLQLAF KTKIKLFFRP TSLDGSTSSA VEKIKLSKLE NGMEINNPTP FFITILSISA
VESGDIEKKL IENIMISPFE VLTVSSEYNS SLVHNISFIN DYGATEKQKI VGL
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