| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2102 |
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| Symbol | |
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| ID | 4252675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 2506435 |
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| End bp | 2507361 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638118726 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_734232 |
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| Protein GI | 113970439 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.307021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.599711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCTT CTGCAGCAAA TAAAGAGCTC GATTCGGCGG CGCAAATCCT GCGATTAGCC
GTGCCACAAA TGTCTGCGCT TGATATTCCC GTGACCCCCG AAAACTACAC GGTTTGGTAT
GAGTATTTTG CCCAGTCAAA CCTCGACTTA AATCGCGCCA TTGATGGCTT TCTGGCAAAC
AAAGTGGTGT TTACCAAAGA GGTGAATACC AGCCTGTACA AGAATTTTAT TCAAGAAAAA
TCCCCAGAAG TGATTGAGAA TGTCCAAATT GAAACTCAAA TATTGATCAA CTCACTGATC
AGTAAAATTT CTCAGTTAAC CCAAGGGACT GAGGCCTTTT CAAGTACCCT GGCGGACTTT
GGACTGCAAC TGCAATCGAC CCCCGATGTC TGCACCTTGA ACCAATTAGT GGGTGGGGTG
ATAGATGAAA TGCAAAATCT CTTAATCAAC AACCAGAACA TGGAGCAAAG CTTAACGGCC
ATGGGGCAAG AGGTGCAGAA CTTAAAATCC GAGATGGAGA ACCTAAGTTT AGCGGCCATG
ACAGATCAAT TGACCTCTCT GCATAACCGC CGCGCCTACG AGATTGCCAT TCAAGATCAT
ATTCACCGCG CGGAGGAGCA GCAAACCCGT TGTAGCCTGT TACTCATCGA TATTGACCGC
TTTAAATTGT TTAACGACAC CTATGGCCAT CAAGTGGGGG ATAAGGTGTT AGCCTATGTT
GCGCTCGCCC TCAAACAATG TGTGCGGGGG GATGACTTTG TCGCCCGCTA TGGCGGTGAA
GAATTTGTGG TGGTGTTGCC TAACACTCAT TTCCACGATG CGCTCCAAGT GGCCGAAACC
TTAAGGGAGC GTATCTCAGA GCGGCGTTTA GCCATAGGCA AAGATAAAAA ACTCTCCCTA
GGCGCGATTA CAGTGTCTAT CGGCTAA
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| Protein sequence | MSSSAANKEL DSAAQILRLA VPQMSALDIP VTPENYTVWY EYFAQSNLDL NRAIDGFLAN
KVVFTKEVNT SLYKNFIQEK SPEVIENVQI ETQILINSLI SKISQLTQGT EAFSSTLADF
GLQLQSTPDV CTLNQLVGGV IDEMQNLLIN NQNMEQSLTA MGQEVQNLKS EMENLSLAAM
TDQLTSLHNR RAYEIAIQDH IHRAEEQQTR CSLLLIDIDR FKLFNDTYGH QVGDKVLAYV
ALALKQCVRG DDFVARYGGE EFVVVLPNTH FHDALQVAET LRERISERRL AIGKDKKLSL
GAITVSIG
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