| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1826 |
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| Symbol | |
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| ID | 4252400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2166419 |
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| End bp | 2167321 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118437 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_733957 |
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| Protein GI | 113970164 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000850306 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAG TTTCCCCTAA TGCGCCTTAT CGACTCCAAC GCCGAGATTG GGGTTATTTA
GGTGAATTTA GGGCCATGGC GAGCCCCTGT GAGTTATTAA TCGCAAGCCA CGACGAAAGC
ATTGCCTACG ATATGCTCGA TATGGCAGCC CGTGAGGCGC AAAGAATCGA GCAAAAATAT
AGCCGCTTTA TTGAGGGCAA TTCTCTGTGG CGGCTTAATC ACGCCCAGGG TGAGCGCGTC
GGCATTGATG AGGAAACTTG GCAGTTGCTA GCTTTTGCCA AGCAATGCTT TGAGTTAAGT
GAAGGGCTAT TTGATGTATC TGCTTGCCCT CTAATGCAAG TATGGCGTTT TACGGCCGAT
GCCAAGATGC CCTCAAAGGC GGATATCGAA GCCGCGCGAG CCTTGGTCGG CTTTGAGCGC
ATCGAATTTA ATTCCCATGA GTTGTTGATG CCCAAAGGCA TGCAGCTCGA TTTTGGCGGT
ATCGCCAAAG AATATGCGGT CGATAGGGTC GCCTATGAGC TTGCCGAGTC CTATGCGGGG
ATTTCGGTAC TGGTCAATTT TGGCGGTGAT ATAGCTTGTC CAGTGGCAAA TGTCGTGCCT
TGGCAGGTGG GTATTGAAGA TCCGCATCAG CTCGACCATG CCGCGAAAGT GCTTGCCATG
ACCCAAGGCG CTTTAGCGAC CAGTGGTGAT ACACGGCGGT TTATTGAAGT CGAGGGTAAA
CGCTATGGAC ATATCGTCGA CCCGCGCACT GGCTATCCTG TAAGTGAGGC GCCGCGCTCG
GTGACGGTAC TTGGGCCAAA CTGCGTCACC GCGGGAATGT TAGCCACCAT GGCCATGTTA
CAGGGTGAAC AGGCCGAAAC TTTTTTAGCC GAGCAATCGG TGCAATTCAG TATTTTTCGA
TAG
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| Protein sequence | MPAVSPNAPY RLQRRDWGYL GEFRAMASPC ELLIASHDES IAYDMLDMAA REAQRIEQKY
SRFIEGNSLW RLNHAQGERV GIDEETWQLL AFAKQCFELS EGLFDVSACP LMQVWRFTAD
AKMPSKADIE AARALVGFER IEFNSHELLM PKGMQLDFGG IAKEYAVDRV AYELAESYAG
ISVLVNFGGD IACPVANVVP WQVGIEDPHQ LDHAAKVLAM TQGALATSGD TRRFIEVEGK
RYGHIVDPRT GYPVSEAPRS VTVLGPNCVT AGMLATMAML QGEQAETFLA EQSVQFSIFR
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