Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_1533 |
Symbol | |
ID | 4252111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 1808445 |
End bp | 1808960 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638118137 |
Product | hypothetical protein |
Protein accession | YP_733668 |
Protein GI | 113969875 |
COG category | [S] Function unknown |
COG ID | [COG4929] Uncharacterized membrane-anchored protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.886614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGG CGACCTTAGC ATTTAGCCGC TTCCATAAGC GCGCCTTAGT CTTAGTGGTG TTTACCGCCG CAGCATTGCT GATAAGCATC AACTGGCGAA TCGCTCAGTT TGAGCAGTTA TTACAAGATG GCCAAGTGGT ACGTTTTGCC TTAGCGCCAG TGGATCCTCG CTCGATTATG CAGGGGGATT ATATGGCTTT GGAGTATGCC ATTGCACAGG AGGTACGCGC CGCACTGCCT GAAGGGATGG CGCAGGGGCA ATTGCTGTTG ACGCTCGACG CGCAAAAAGT GGCGCACTTT GTTGGTATTT ACCGTGATCA ACCCAAAACG GCTGAGCAAC TCACGGTAGA TTTTCGTCTG CGTAATCATA GAGTAAAGCT CGCCTCAAAT AGTTTCTTCT TCGAAGAGGG TCAAGCTGAC CACTTCAGCC AAGCCAAGTA TGGAGAATTC AGAGTCAGCG AACGGGGAGA GTTGTTGTTG GTGAATCTGC TGGATGAGCA GTTGCAGCCG TTATAG
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Protein sequence | MDKATLAFSR FHKRALVLVV FTAAALLISI NWRIAQFEQL LQDGQVVRFA LAPVDPRSIM QGDYMALEYA IAQEVRAALP EGMAQGQLLL TLDAQKVAHF VGIYRDQPKT AEQLTVDFRL RNHRVKLASN SFFFEEGQAD HFSQAKYGEF RVSERGELLL VNLLDEQLQP L
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