Gene Shewmr4_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_1533 
Symbol 
ID4252111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp1808445 
End bp1808960 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content50% 
IMG OID638118137 
Producthypothetical protein 
Protein accessionYP_733668 
Protein GI113969875 
COG category[S] Function unknown 
COG ID[COG4929] Uncharacterized membrane-anchored protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.886614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG CGACCTTAGC ATTTAGCCGC TTCCATAAGC GCGCCTTAGT CTTAGTGGTG 
TTTACCGCCG CAGCATTGCT GATAAGCATC AACTGGCGAA TCGCTCAGTT TGAGCAGTTA
TTACAAGATG GCCAAGTGGT ACGTTTTGCC TTAGCGCCAG TGGATCCTCG CTCGATTATG
CAGGGGGATT ATATGGCTTT GGAGTATGCC ATTGCACAGG AGGTACGCGC CGCACTGCCT
GAAGGGATGG CGCAGGGGCA ATTGCTGTTG ACGCTCGACG CGCAAAAAGT GGCGCACTTT
GTTGGTATTT ACCGTGATCA ACCCAAAACG GCTGAGCAAC TCACGGTAGA TTTTCGTCTG
CGTAATCATA GAGTAAAGCT CGCCTCAAAT AGTTTCTTCT TCGAAGAGGG TCAAGCTGAC
CACTTCAGCC AAGCCAAGTA TGGAGAATTC AGAGTCAGCG AACGGGGAGA GTTGTTGTTG
GTGAATCTGC TGGATGAGCA GTTGCAGCCG TTATAG
 
Protein sequence
MDKATLAFSR FHKRALVLVV FTAAALLISI NWRIAQFEQL LQDGQVVRFA LAPVDPRSIM 
QGDYMALEYA IAQEVRAALP EGMAQGQLLL TLDAQKVAHF VGIYRDQPKT AEQLTVDFRL
RNHRVKLASN SFFFEEGQAD HFSQAKYGEF RVSERGELLL VNLLDEQLQP L