| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1154 |
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| Symbol | |
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| ID | 4251822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 1356563 |
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| End bp | 1357285 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638117735 |
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| Product | hypothetical protein |
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| Protein accession | YP_733291 |
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| Protein GI | 113969498 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCAGAG CATATCAAAA CCGTAAAGAA TCCATGGCGA AAACAGCTGG CCAGAAAACC
CGCCTCTACT CGCGCTACGG TAAAGAAATT TACGTAGTCG CCAAGCAAGG TGGTGTTGAG
CCAGACGGCA ACTTATCACT TCGCCGTTTA ATCGAACGCG CTAAGAAAGA CCAAGTGCCG
GCACACGTTA TCGAACGTGC TATTGATAAA GCCAAGGGTG GCGGCGGTGA AGATTATGAT
ACAGCTCGTT ATGAAGGTTT CGGCCCAGGT AACTGTATGG TTATCGTGGA CTGCTTAACC
GACAACGTAA AACGTACCTT CACCGAAGTA CGTCAAGCCT TCGTGAAGAA CGATGCCAAA
CTCGGCACCC CAGGCACTGT GGGCCACATG TTTGATCAAT CTGCTGTGTT CGTATTCCCG
GGTGAAGACG AAGATGCCAT CCTCGAGATC CTGATGATGG CCGATGCCGA TGTAAACGAC
GTCGAAGTGG AAAACGGCAT GATCAGCGTT ATCGCGCCGC ACACTGAGTT CTTCAAAGTG
AAAACCGCAC TGACCGATGC GATGCCAGAC ATCAACTTCG AAGTGGAAAA CATCACCTTC
GTACCACAGA ACATGACGCC TGTGTCTGGC GAAGATATCG CGACATTCGA TAAGTTTATT
GCCGCATTAG AAGATTGTGA CGACGTGCAA AACGTGTATC ACAATGCAGA CATTCAAGAA
TAA
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| Protein sequence | MGRAYQNRKE SMAKTAGQKT RLYSRYGKEI YVVAKQGGVE PDGNLSLRRL IERAKKDQVP
AHVIERAIDK AKGGGGEDYD TARYEGFGPG NCMVIVDCLT DNVKRTFTEV RQAFVKNDAK
LGTPGTVGHM FDQSAVFVFP GEDEDAILEI LMMADADVND VEVENGMISV IAPHTEFFKV
KTALTDAMPD INFEVENITF VPQNMTPVSG EDIATFDKFI AALEDCDDVQ NVYHNADIQE
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