Gene Shewmr4_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0488 
Symbol 
ID4250912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp559496 
End bp561625 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content49% 
IMG OID638117047 
Productcytochrome c, putative 
Protein accessionYP_732625 
Protein GI113968832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAT GGAAATCCAA AGTAGCATTA AGCGTGCTAT TTTGTTTAGG TTCTGCCGTA 
AGCGCTACCA CAGTCGCTGC CGATGCTAAG TCGGAGGGGA AAGTGGTACC TGGAGTGGGT
AATAAACAGC AATCCCACTA TACTCAAGAT ATTCTGGCTA ACCCCAATTT AAATGAAAAT
TTAATGGAGA AATCCCGCGG TGTGAAAACA CTGCAGGATT ATATTGTTCA AGAGCAAGAA
TTGTTTGATT TTCTATTTGA AAATCACCCA GTTTTTAAAT ACGACGCTGA AGGTCGATTA
AAGGGCACTT ATAAAGTCAG TGACCGTGGT GAAGAATATT TGCACGGTGG TGACAGTGTT
GCTTACAGCA AACACAGTAA AGAAGTGAAC CCCACTGATG GCACCGCAGT GCGTTACAGC
TCCTATAACG ATGGCCAGCG TCCTAAGGCA CTGCAATACC GTTTAGGAGC CAAATCGATT
TTAGATTTCC CGAACAAGTT TGTCGGCCCA GAAAAATGCG GTGAGTGTCA CGGTCCGCAA
TACGAGAAGT GGAGACGTTC ACGCCACTCT AAGACGATTC GCTTCCCTGG CGAGCATCCT
GAGGTCGATA ACGACCTGAA GAAAACCATG TATGGCACTA AGGATACCTC GATTCTGCCA
TCGGGTATTA CCGCCGATGC CATCTACGCC ACTGTGGGTA CACCACGGAC TAAGTATGGT
TTTATCGACG CCTACCTAGT GCGTGGTACT TATCACGTGA AAGACGGTCT GTTGAAGGAT
GGCACTGGGA CTATGGTCGC TGGTGGTAAC CAGTTCTCCC GTGGTTGGGC TGAGTGGTTA
ACCCCTGAAA TGGCAGCCAA AATCAACAAA GCTATCCCAA GCTTCCCCGT CAAAATGGAA
GACTTCGGTA CCAGCGGTTC ACACCAATGG GGCATGAGTT CATACGGCGC TAAGTACGAG
AAGGAATTCC TGTTCCAACC GGCTAGCTCC TATTGCGAAA TGTGCCACAG CTTTAAGTTT
GACTTCCAAA CTAAAGATGA ATTTTTCGCG GCTTTAGGTA ACCCAAAAGA GCTGCAAAAA
CACACGATTT CTAAAGGGAT TACCTGTGAA GAGTGTCACG GCGCAGGTGG TCACTTAGAC
GGTGGTATTG GTGGTGGCAT GCCATCTAAC TGTGAACGTT GTCACCAACG CTTTAACTTT
GTTGAAGAGT TAGCCGACAC GCCACAGGGT AAAGAGAAGC TGGAATATGC CTTCAACGTG
AAGATGAAGT CTTCTTGCCC ATCCTGTGGT ACTGAAGGTT CGCAAATGTT TGCCTCAGCG
CACTATGACA AAGGCATGCG TTGTTCAACC TGTCACGATC CGCACGAAGT CACCGACGGT
GATTGGACTA CGGGTATGAC TAAGCCAAAA ATCATCAAAG AGTGTACTGA CTGTCACACG
GCCCAAGCCG AGATCGCCAA GAACACTAAC ACCCACAGCA ACCAAACCTG TCAAAGCTGT
CATATGCCAA ACATGGGAAG TTGTGAAAAC TTCACGGCGA TCCAATTCCC AGATATGGCG
GGCTTCGACA ACGTGCGTAA GTCACACATG TGGAAGATTG ATGTCGACCC ACTGCGTAAG
ACCCTCAACC CACCTGAAGG CAAGTCTCGC GATGCGACCA CTAAGGGCTG GACTGTGGCG
AAAGACGAGA ACGGCTACAA CTACCTCGAC CTGATGTGGA CCTGTGCCCG TACATCTGCC
TCAGACCATG ATGTGGTGGA TAACAAAGGT TGTCATAGCC AGTTCCAATC TGAGCTAGAA
GTCGGCCTGC ACTTCGAAGA TCAGCTGGAA ATCTACGGCG AAGTTCAAAA GTGGCAAAAA
CCCGTTAAGG ATACTTTTGC TCAAGTAGAA CAAGCCCTTG CCCGTATCGA CAAGCTGTTA
GAAGTCACCA AGCTGTCGGT AGAAGACAAG ACTCAAGTGT TGATGTTGAC CGACAAAGCC
CAGGACGTTG TTCGCCTAAT CAAGGCTGAC GGCTCATGGG GTGTCCATGG TCCACGTTAT
TCACTGAAAC GTCTCGACGC TGCCTTGACC TATGTTACTC AAGCCCAAGC CATTATCGAT
GGCAACGGCC TGAGCGCACA GAAAATGTAG
 
Protein sequence
MKRWKSKVAL SVLFCLGSAV SATTVAADAK SEGKVVPGVG NKQQSHYTQD ILANPNLNEN 
LMEKSRGVKT LQDYIVQEQE LFDFLFENHP VFKYDAEGRL KGTYKVSDRG EEYLHGGDSV
AYSKHSKEVN PTDGTAVRYS SYNDGQRPKA LQYRLGAKSI LDFPNKFVGP EKCGECHGPQ
YEKWRRSRHS KTIRFPGEHP EVDNDLKKTM YGTKDTSILP SGITADAIYA TVGTPRTKYG
FIDAYLVRGT YHVKDGLLKD GTGTMVAGGN QFSRGWAEWL TPEMAAKINK AIPSFPVKME
DFGTSGSHQW GMSSYGAKYE KEFLFQPASS YCEMCHSFKF DFQTKDEFFA ALGNPKELQK
HTISKGITCE ECHGAGGHLD GGIGGGMPSN CERCHQRFNF VEELADTPQG KEKLEYAFNV
KMKSSCPSCG TEGSQMFASA HYDKGMRCST CHDPHEVTDG DWTTGMTKPK IIKECTDCHT
AQAEIAKNTN THSNQTCQSC HMPNMGSCEN FTAIQFPDMA GFDNVRKSHM WKIDVDPLRK
TLNPPEGKSR DATTKGWTVA KDENGYNYLD LMWTCARTSA SDHDVVDNKG CHSQFQSELE
VGLHFEDQLE IYGEVQKWQK PVKDTFAQVE QALARIDKLL EVTKLSVEDK TQVLMLTDKA
QDVVRLIKAD GSWGVHGPRY SLKRLDAALT YVTQAQAIID GNGLSAQKM