Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0478 |
Symbol | |
ID | 4250902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 544028 |
End bp | 544948 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638117037 |
Product | redoxin domain-containing protein |
Protein accession | YP_732615 |
Protein GI | 113968822 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTAC GTCGAATCAT AGTTACCTGT CTCGCCCTTA TCAGTTTTTC CACTTTTGCT GTCGATAAAA GCTATCAAGA TATAGTGCTA AAAATCTATC CAGATCAACA GCAAACCTCC TTAAAAAACA TCGCTGGCGA TAAACCGATT TACCTTAAGT TTTGGGCAAC CTGGTGTCAG CCCTGTATGG AGCAGATGCC GCATTTTGAG GAATTGCAGA AAAAGTATCA GGACAAGGTC AATATTCTTG CCCTGAATAT CAATATCAAC GAAGAACAAC CTAAAATTGC CGAAGTCATC TCCCGTTTCG GTCTGACTAT GCCAGTCTGG CTAGACAACG AAGGTGAATT GGGTGTGGCC CTTGGCTTGG TCGGGACCCC CTATAGCGTG TTAATCAATC GCGCGGGCGA GGTGGTTTAC ACTAGCCATG AGTCGGATGC GAACCTCGAT AAATTTATCG ATATGTTGGC CAATGGCCAA GAGCTCAGCG CACAAACTAC AGATGCGCCA AGCCCAGAAC AAACGGCTAA GCTGCTGAAA CCTTGGGAGC AAGGTGAGCA TTTACTGTTT TTTACTGCCA CTTGGTGTGA TTGGTATTTG GCAGAGAGTC GCCCTGAAAT GTCTCAGGCC TGTGTTGCCG CCCAGAAAGA TTTAGACAAG CTAGCGCAAA AATTGCCGAA CAAAGCCTGG CATGGGGTGG TAAATCATCT GTGGACGGAC GATAAAGCCC TCGCCGATTT TAAACAGCTC TATCCTTCAC GCGTCGATTT CAGTATCGAT GAATTAGGCG TGCTATTTAA TCACTTTAGT ATCCGCAACA TCCCGACATT GCTTTGGGTG AAAGACGGTA AAGTCATTGA GCGTATTACC GATTTTAGCC AGCCAGAGAA AATTGTCGTA AGGCTCAAGG CCGCGCCATA G
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Protein sequence | MLLRRIIVTC LALISFSTFA VDKSYQDIVL KIYPDQQQTS LKNIAGDKPI YLKFWATWCQ PCMEQMPHFE ELQKKYQDKV NILALNININ EEQPKIAEVI SRFGLTMPVW LDNEGELGVA LGLVGTPYSV LINRAGEVVY TSHESDANLD KFIDMLANGQ ELSAQTTDAP SPEQTAKLLK PWEQGEHLLF FTATWCDWYL AESRPEMSQA CVAAQKDLDK LAQKLPNKAW HGVVNHLWTD DKALADFKQL YPSRVDFSID ELGVLFNHFS IRNIPTLLWV KDGKVIERIT DFSQPEKIVV RLKAAP
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