Gene Shewmr4_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0408 
Symbol 
ID4251951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp454434 
End bp455351 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content49% 
IMG OID638116967 
ProductLysR family transcriptional regulator 
Protein accessionYP_732545 
Protein GI113968752 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA ATGATCTCGC ACTATTTGTT CGCGTTGCCG ATTGCGGCAG TATTTCTGCA 
GCGGCTGCCG AGATGGAGCT TTCTGCGGCT TCGGCCAGTG CAGCGATTAA ACGCCTAGAA
AAACAGCTTG ATACTAGTTT ATTTGTGCGC ACGACCCGTA GCCTTAGGTT AACCGCCCAA
GGTGAGCGTT ATCTAATCCA TTGCCGCCGT GCCTTAAGTG ATCTCGCCCT CGGAGAGCAG
GCGATCGCCA GCGATAAAGG CAAGATATCT GGCACCTTGA GCCTATCGGT TTCATCCGAC
TTTGGGCGCA ACTTATTTGT CCCTTGGCTC GATGACTTCC TGTTAGATTT TCCGCAGCTA
CAAGTACGTT TGCATTTAGG CGATAACATC AGCAGCTTTT ACCACGACAA AATCGATGTC
GCGGTGCGTT ACGGTAAGCC GCAGGATTCA AATCAGGTCG CCTTCCCGAT TTGTTCTGTT
GATAGGGTGT TATGTGCTTC GCCTGAATAT CTAGCAAAGT TTGGCAAACC CGAAACCTTA
GAGCAGCTAA CTCAACACAA TTGCTTGTTT TATAAGTTAG ATGATAGAAC CCATGACCAA
TGGCAATTTG AACGGGATGG GCAAGAATTT AAAATCCGCG TCACGGGGAA TCGTAGTGCG
AACGATGCGG AAATTGCACG CCGCTGGGCA GTTGCAGGGA AGGGCTTAGT ATTTAAATCG
AGCCTAGATC TGGCTGAAGA TATTATGGCG GGGCGCCTTG TGCCCTTGCT GCCTGAATAT
CGAGGAGAGG CGGTTAATCT ATACTTAGTG TGCCCTGGGC GTGAGCATGT CACACCCGTC
GTGCTATTGC TGCGCGAAAT GCTTAGACAA CAGACCCAAA CTTTAAGCCG TGCCTTGGTG
GTGTATTTAA AATCTTAA
 
Protein sequence
MLLNDLALFV RVADCGSISA AAAEMELSAA SASAAIKRLE KQLDTSLFVR TTRSLRLTAQ 
GERYLIHCRR ALSDLALGEQ AIASDKGKIS GTLSLSVSSD FGRNLFVPWL DDFLLDFPQL
QVRLHLGDNI SSFYHDKIDV AVRYGKPQDS NQVAFPICSV DRVLCASPEY LAKFGKPETL
EQLTQHNCLF YKLDDRTHDQ WQFERDGQEF KIRVTGNRSA NDAEIARRWA VAGKGLVFKS
SLDLAEDIMA GRLVPLLPEY RGEAVNLYLV CPGREHVTPV VLLLREMLRQ QTQTLSRALV
VYLKS