Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4207 |
Symbol | |
ID | 4475878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 75580 |
End bp | 76659 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639720565 |
Product | TraU family protein |
Protein accession | YP_863723 |
Protein GI | 117676147 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00154228 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACT CGGTTTGCCC CGATGCTGGC TATTTCTCAA ACCTGATTAA CTCTTTTTGC TGGTCATGTA CGCTACCTTT TAACCTCGCC GGATTCTCGG ACAATGTGCC TAAAGGGGCT AATTCGAGTC GTTTATGCTC ATGCTCGGAT GCTCTGGGTG TGCCGGAGCT TGGGGTATCT CTGGGTTACT GGTCACCTGA TCATTTAGTA GAAGTCTCTG CAACGCCATG GTGCAGTCCA ACGCTGGGTG GAACCTTGCT ACAAAATGAC ATGACGATGC GGGGGAGGGC ATCCAACCCA GATACTCAAT CTGCCGAAAC GGTATCGTTC TTACATTACA ACTACATCAT CAATCCGGTT TTCAAGATGT TAGGTCTTTT CTTGTTGCCT GAGTGCGACA CATCCCCTGG TTACTTTGAC CTCGATATTG CGTACATGTC AATTCTCGAT GTCACCTACG AAAACTCGGC GCTATCATTT CTGTTCACTC CTGACGCAAT TCCGATTGCG AATCCTGTTG GCCGCGCCAT TTGTGTTGCC GATGGGATGA TCACTGCTAG TAGCGGCAGT GCTAACGAGG CACTGTGGTT CTGCGCTGGC TTAGATGGTC CCTTGTATCC ATTAACCGGC TTTATTGGGG CCGACAATGA TTTTATCCGC AATACCCAGT TAATCACGAC TCGTTCACTT GCTGCGCTAC ATCGCAGGGG GTTAGCACGA AAAACTTACG GTAAAGAGGC GATGTGTAAC GCCGAGTACA GTCCAATGAT CCCTAAGGCG CAGTACAAAA TTTCTATGAT GTATCCGTCT CCTGAAGCGA ATCCTGCAGC AGCATCAGCC GTGAAACCCA CGAAGGCTTT TAATATTGAG GATCTACAAA ATCCTGAAAC TGGCGATTAC GACAACAGCG AAGATAAAAA TAAATCAACC CTAGATGGTT CATGGGATGA ATGTTGTCAC CCTCTCGGTT GGCCTACGAT TTGGTGGGGT TCAGGTAGAA AGTCTCCTGG TAATGGAAAA GACCAACACG CGGTTTATTC AATTTTCAGA TACACCGATT GCTGTGTGAG GGTTCAATAA
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Protein sequence | MPDSVCPDAG YFSNLINSFC WSCTLPFNLA GFSDNVPKGA NSSRLCSCSD ALGVPELGVS LGYWSPDHLV EVSATPWCSP TLGGTLLQND MTMRGRASNP DTQSAETVSF LHYNYIINPV FKMLGLFLLP ECDTSPGYFD LDIAYMSILD VTYENSALSF LFTPDAIPIA NPVGRAICVA DGMITASSGS ANEALWFCAG LDGPLYPLTG FIGADNDFIR NTQLITTRSL AALHRRGLAR KTYGKEAMCN AEYSPMIPKA QYKISMMYPS PEANPAAASA VKPTKAFNIE DLQNPETGDY DNSEDKNKST LDGSWDECCH PLGWPTIWWG SGRKSPGNGK DQHAVYSIFR YTDCCVRVQ
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