Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4146 |
Symbol | |
ID | 4475922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | - |
Start bp | 5788 |
End bp | 6504 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639720504 |
Product | GntR family transcriptional regulator |
Protein accession | YP_863662 |
Protein GI | 117676086 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.994574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.105944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATTTTA TCATTGTTAT AAAAACAGAA ATAAACACCA TTGAGGGAAA GCGGATGTTA ACGAAATTCA AGTCAGTTGA ACAGATAAAA GCATCCAACA ATATTTATGG TCAGTTAAGT ACAGCCATTT TTGATGGCCG CTATATTGCA GGGCAAAAGC TTCCATCGGA AAGTGAATTA ATTCGTTGCT TCAATGTGAG CAGAACAACG ATAAGGGAAG CAATAAAAGG ACTAGAGGCC AGTCGCTTAG TTGATATTAA ACGTGGCGCA ACGGGGGGAG CCTTTGTTAG ACCGGTTACA TTTGAACGGG TTGAGTCTGC GTGTAATGAG CTGTTTAGCG CCGGGAAATT TTCTTTTTTC GAGTTACAGT ATGCGCTGCT ACTCATTGGG CAAATGATTG CTCGTATAGC TGCGCACAAT TGCACAAGTA AAGATGTTGA AAATCTAAGG ATAATTGCTT CAATGAAGCA TATATCTTGT CAAGTATTAA CAGAGCAAAT AGCGGGCTTA ACAAACAATC GCTTTTTGAC AGGCTTATTT CAATCATTGG TGCAAGTCGC TACAGCTAAT GTAAAAGAAG AGCGTCATTC TTACACTATA TCAATGCAGT TCAATACCAA AGGATTAGAG CTTATTGAGG CCATAGCCCA GAGAGATGAA AACATGGCCG AAATGGCAAT GAGCCAGATG TTAAGGTCTT ACTTTGACGA TAGATAA
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Protein sequence | MNFIIVIKTE INTIEGKRML TKFKSVEQIK ASNNIYGQLS TAIFDGRYIA GQKLPSESEL IRCFNVSRTT IREAIKGLEA SRLVDIKRGA TGGAFVRPVT FERVESACNE LFSAGKFSFF ELQYALLLIG QMIARIAAHN CTSKDVENLR IIASMKHISC QVLTEQIAGL TNNRFLTGLF QSLVQVATAN VKEERHSYTI SMQFNTKGLE LIEAIAQRDE NMAEMAMSQM LRSYFDDR
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