| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_3661 |
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| Symbol | |
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| ID | 4476260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4397841 |
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| End bp | 4399184 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639728266 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_871286 |
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| Protein GI | 117922094 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTGA TCAACAAGAT GCTGCAGGAT CTCGATAAGC GCCAGCAGGG GCATTCCCTT
AGCAATGTCG CTGTGCATCA GGCGCAGTAT TTAGGGCGCC CCAATCCATC ACGCAAATGG
TTAGTAATCA GCTTAGTGTC GCTGCTAGTG GGCGGCTTAT CGGTCTATGC TTTTCAGGCG
AGTTACGGCG TAAAGAGCGT CGCGGATAAC AGTGTAAATC CTGTAGCGAG TTCGCAAACT
CAGCCGGATA ACGCCAGCCC ACAGATAGAT ACGAGTCCTC TGGAAACAGA AACGACTAAA
TCAACATATA CGACGATACC AACCGAGCCA ACTGCCGAGA TGGTACAAGT GAGTCCGTCA
TCGACAGAGG TTCCTGCAAA GGATATGTCA GCGTCAGCAG AATCTGCGCC AAGTGTGGCT
CAATCTGCCC GTTTAAACGC GGCGCAAGTA GAACCAACGA GTGAACCGAG AGCCGAACCC
GTTGCGACAA ACACCTCAAC TGATACGTCT AACAATGCGG CATTAACCCA AGAGTCGGCG
CAAACACAGG CTGAGTCACA ACAGGTTGCG GTTAAAGCAA ATCAAGCAGA CGTTAACGCA
AATCAGAGCG AAGTAAAAAT AATTCAAACA GACCCTAAGG CGAGTGAGCC CGTCGTGCCT
GCTGCGACTC AAGCTTCGCG CCAAACTTCG CCTCAAGCTT CGAGCCCAGC TTCGGCTCAG
GCTCAGTCAA CGGGGCAAAT GGCGATTCGA GAAGTGAAGT TATCACCAAG CCAACTCGCG
CAAAAACAGT TAGTGTTGGC GGCGGATGCC GAAAAGCAGG GGCAGCTGGT TAAGGCGATG
GATTACTACG CTAAAGCACT CAGGCTCGAC CCAAGCTTGC ACGAATCACG CAAACAACTG
GCGGCGCTGC ATTATGGTCA AGGCGAGCTG GCGCAAGCGG CCGAAGTGTT GGCGCAGGGA
CGATTGCTTT ATCCGCAAGA GTTTGAATTT GCTTTGCTAT TGGCAAGGGT GCAACATGTT
ATGGGCGAGA CAGATTCGGC TCTTGCTAGC CTTGCTCAAA TTCCCGATAG CCATAGCTTG
GCGAGGCAAA AGTGGTTAGC GCAAACGGAT TTGGCCCAAA AACAAGGGCA ATATCCGTTA
GTCGAGCAGG CTTACCGCAA GTTATTGCAG CAGGAGCCAC AGCAGGGGAA ATGGTGGATG
GGATTAGCCT ATGCCCTCGA TTCACAGCAG CAATTCGGCC CCGCCAGTCA GGCCTATCGC
ACTGCCTTAA GTTATTCAGG CCTGTCGACC CAAGCCACGG CTTTTATTGA ACAACGTTTA
CAACAACTAG GAGATAGCCA ATGA
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| Protein sequence | MSVINKMLQD LDKRQQGHSL SNVAVHQAQY LGRPNPSRKW LVISLVSLLV GGLSVYAFQA
SYGVKSVADN SVNPVASSQT QPDNASPQID TSPLETETTK STYTTIPTEP TAEMVQVSPS
STEVPAKDMS ASAESAPSVA QSARLNAAQV EPTSEPRAEP VATNTSTDTS NNAALTQESA
QTQAESQQVA VKANQADVNA NQSEVKIIQT DPKASEPVVP AATQASRQTS PQASSPASAQ
AQSTGQMAIR EVKLSPSQLA QKQLVLAADA EKQGQLVKAM DYYAKALRLD PSLHESRKQL
AALHYGQGEL AQAAEVLAQG RLLYPQEFEF ALLLARVQHV MGETDSALAS LAQIPDSHSL
ARQKWLAQTD LAQKQGQYPL VEQAYRKLLQ QEPQQGKWWM GLAYALDSQQ QFGPASQAYR
TALSYSGLST QATAFIEQRL QQLGDSQ
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