Gene Shewana3_2197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_2197 
Symbol 
ID4478593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp2637057 
End bp2637953 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content46% 
IMG OID639726792 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_869832 
Protein GI117920640 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0276351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAGG TATTCGCTAC CCTCGTTCTT TTAACGTATA GCTTCATTGT TCAAGCCAAT 
TCGATCAGTG TTGAGCGAGT CTCTGAACAA GTACATCTTT TAAAAGGCAT AGATTACGGC
ACCAATATTG GACTGATATT GACGCAGGAT GGTTTAGTGC TTATCGATCC TATGCCTGGG
GATGAACACT TAGGTGCTCT GGATGATGCG ATTCAATCTC TCTATGTCAA ACCCGTTAAA
TTCATCTTAA ATACCCATGA ACACGCCGAT CATACCGGCG GTAATCAGCA CTTTATCCAA
CAGGGTGCGA GCCTAGTGCC AACGCAAGAC ACAGTTCCAT CGCAAAACGT ATCTTCACTA
AAAGTACCGT TGCAAAATAC AGCCCAGATG CAGAACACGG TGGCAGCGCA AAAAACTGTG
CCAATGCAAC CCGTGATAAC CGATATATTG GCCACCCAAG TATCATCCCA TTCATCAGCT
GACTGGATTT ATTTTCATCC ATGGAGCAAC AGCCTGTTTG TCGGCGATAT TGTCGATAAC
AGCTGGCATC CGACTTTTTA TGCTGGTGGT ATTAGCGGAT TTAATGCCGC CATCAACCAT
ATTTTAGCCA TAGGTAATGA GGACAGCCTT ATCGTACCTG GCCATGGTAA GCCAAGTAGT
AAGGCATCCC TGCGCCGCTT TCAGCAAAAC ACCAATGACT GGGTGCAACA TATCGAGTCG
CTAATTGACT CAGGCAAGAG TGTGGAACAG ATAACCCAAC ATCCACAGAT CGCAGAGCGG
GTTGCGCGCT TTAATCAGGA GGGCAAATCC CCTTTTCTGC CGCCAAAAGC CTTGAGGAAA
TTTATCGAAC GTACCATTGC CGTGATAGAA AAAGAACGTC AAACATCGGG AAAATAA
 
Protein sequence
MHKVFATLVL LTYSFIVQAN SISVERVSEQ VHLLKGIDYG TNIGLILTQD GLVLIDPMPG 
DEHLGALDDA IQSLYVKPVK FILNTHEHAD HTGGNQHFIQ QGASLVPTQD TVPSQNVSSL
KVPLQNTAQM QNTVAAQKTV PMQPVITDIL ATQVSSHSSA DWIYFHPWSN SLFVGDIVDN
SWHPTFYAGG ISGFNAAINH ILAIGNEDSL IVPGHGKPSS KASLRRFQQN TNDWVQHIES
LIDSGKSVEQ ITQHPQIAER VARFNQEGKS PFLPPKALRK FIERTIAVIE KERQTSGK