| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1874 |
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| Symbol | |
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| ID | 4478182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 2219231 |
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| End bp | 2220109 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639726456 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_869511 |
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| Protein GI | 117920319 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.780478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTC GCCATCTGCA TTACTTCCAA CAACTCGCGC AATTACAGCA TTTTGCCAAA
GCGGCGAACG CCTGCCATGT GACGCAACCG ACGCTCTCTG CGGGGATCAG TGCCCTTGAA
AAAAGCCTTG GCACTGAGCT GGTGGTGCGG GGCAGCCAGT TTGTGGCGCT CACGGATGCG
GGGCAGATCA TGCTGCAATA CGCTGAGAGA ATGTTGCAGG AACAGGCGGC GTTAAAGCAG
GAATTGAGTC TGTTTCGCGG CCAGCTCACC GGTTCGTTAC GGATTGGCAT AGTGCCGCAA
TCGAGTATCG ACATCATGCC GCTGATTAAG CTGTTTAATC AGGCTTATCC CAATATCAGC
ATCAAGTTAT CTGTGATGAC CAATGGGCAA TTGATTGAAA GCCTGAGCTT ACATAAAACC
GATATCGGCC TTGGATTTGA CGAACAACTC ACCGAGGCTA ATCGACGCAG CTTTGTGTTT
TATCCGCAGC GGGCCAATCA AATGGCGCTG TTGTCCTGTG ATTCGGTTGA TGACAGTGCA
AGCAAGTGCT TGTCTTTATA TGACATTGGC ACGCGTCCCT TAGTGCTGCT GAGTCAAAAT
ATGCAGTTTA GAAAATACAT AGATAATGCA ATGGCGCAGG CGGGGATTGA TTTTAATCTG
GTGCTGGAAA CCGACTCATT ATTCCACCTA ATCGGCGCGG TAAAACATGG CTTAGGCAGT
GCGATCGTCA GCCGCGGTAT TGCCGAATCG GTGGCGCAAC TCTTTGGGAT CCCATATCAG
CTTTTGGACG GTGTCAGTTC AGGGCAAACG GTCTTTATGA CCCGTAAGCA CAGTATTACG
CCCGCAATGA AAGCTTTTAT GCGTCAGCTT GAGTCTTAA
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| Protein sequence | MNIRHLHYFQ QLAQLQHFAK AANACHVTQP TLSAGISALE KSLGTELVVR GSQFVALTDA
GQIMLQYAER MLQEQAALKQ ELSLFRGQLT GSLRIGIVPQ SSIDIMPLIK LFNQAYPNIS
IKLSVMTNGQ LIESLSLHKT DIGLGFDEQL TEANRRSFVF YPQRANQMAL LSCDSVDDSA
SKCLSLYDIG TRPLVLLSQN MQFRKYIDNA MAQAGIDFNL VLETDSLFHL IGAVKHGLGS
AIVSRGIAES VAQLFGIPYQ LLDGVSSGQT VFMTRKHSIT PAMKAFMRQL ES
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