Gene Shewana3_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1592 
Symbol 
ID4476547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1868461 
End bp1869525 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content51% 
IMG OID639726167 
Producthypothetical protein 
Protein accessionYP_869232 
Protein GI117920040 
COG category[S] Function unknown 
COG ID[COG4984] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.644089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCCATC TTACCTCGCA CGTCTATGAA TGGTTGGAAC AGGGACATAT CACGCCAACC 
GAGGCAAATG AACTCTATCG ACAGTTATCC GTACCACCCA ATGCCGCCAG TTGGCGCAGC
TTATTAGCGC AGCTTTTACA ATGGGCGGGG GCGTTAAGCT TTGCCTGCGG GGTGATTTTC
TTTTTTGCCT ATAACTGGCA GTCGCTCGCG CGAATGAGCA AGTTTGCGCT GATTGAAGCG
GCGCTATTAA TTAGCCTTGT CAGCTTTGTC TGGTTGTATT ATCACAGCGC AGCGAAGCAG
CTCGTTGACC CTTCTCATTG TCTGTTCGGA GCAACCCTTG CCAATGCTGC GCTGCTGGTG
GTGAGCATGT TAGTGGGTGG GCTGCTCGCC CTCGTTGGGC AAACTTATCA AACTGGCGCC
GATCCTTGGC AGCTGTTCGC CATTTGGGCG CTTGCGATTT TGCCCTTCGC ATGGGTGGCA
GGCTTTGATG GCCTATGGTT ACTGCTGGTG GGGCTAGTTA ATTTAAGCCT TGGGTTGTAT
GCCGATACGA CTTTGCTCTG GCTGGATGAA CAGTTGTGGT TATGTCTCTT TGTGGTCCTT
AATCTGACCA TCTACTACGG TTTTGTGTTT CTCGGCAGTA CCAGCAGACG TTGGCATGCG
CCATTCGTAG AGTATGCGAG TTCATTGACG GCCATGGGGT GCTTTACCTT ACTGGTGTGT
TGGATGATTT TTGAGCCGAG CGACACTAAG CCGCTGCTGG TTGCGGTGTG GGTTGGTTAT
TTTGGCCATC TATTGTTTGG ATTCTGGTGG TTCAGGCACA AACGATTGCA GGTTTATCCC
TTGGCATTGG GTGGTTTTAG CTTGATCAGC GTCGGCGCGG CGTTATTCAC CGAACTGCTG
TTTCGCAATA GCGATCCCAT TGGCGGCTTT TTGTTGATTG GGCTTTACAT CATTTTAGCG
AGCACAGGCT TAAGCACTGT GTTAAGGCGA TTGCATCGGC AAGCTAAAGC GGGCATCTCG
CCTACGCAGA CTCCCAGTGA GAATGAGGAG CTAAGCCATG AATAA
 
Protein sequence
MRHLTSHVYE WLEQGHITPT EANELYRQLS VPPNAASWRS LLAQLLQWAG ALSFACGVIF 
FFAYNWQSLA RMSKFALIEA ALLISLVSFV WLYYHSAAKQ LVDPSHCLFG ATLANAALLV
VSMLVGGLLA LVGQTYQTGA DPWQLFAIWA LAILPFAWVA GFDGLWLLLV GLVNLSLGLY
ADTTLLWLDE QLWLCLFVVL NLTIYYGFVF LGSTSRRWHA PFVEYASSLT AMGCFTLLVC
WMIFEPSDTK PLLVAVWVGY FGHLLFGFWW FRHKRLQVYP LALGGFSLIS VGAALFTELL
FRNSDPIGGF LLIGLYIILA STGLSTVLRR LHRQAKAGIS PTQTPSENEE LSHE