Gene Shewana3_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_1560 
Symbol 
ID4478784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp1821996 
End bp1823069 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content49% 
IMG OID639726130 
Productmethyltransferase type 12 
Protein accessionYP_869200 
Protein GI117920008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.103228 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT ACCACACCCC AAAAGCCTTA AGCGCCTTCG ATGCCAAATT TGAGGCGCAA 
AAAATCGCCT TTGGCCCCAT TAGTTTTCAG GTTGCCCATT GCCTGCTGAA ATTTGAAGTA
TTAGCCACCA TTGACCAAGC AGGCGAACAA GGGCTGAGCA TCGCCCAACT TGCGCAAACC
AATGTGTTAA ACGAGTATGC CCTTGGCGTC TTACTCGATA TGGGACTGAG CATGGGGCTG
GTATGGCTCA ATGGTGATGC CTATGTGCTC GATAAAACAG GCTATTTTTT ACTGCACGAT
GATATGGCGG CCATTAACCT CAACTTTGTG CAGGACGTGT GTTACCAGGG ACTGTTTCAA
CTCGATAAGG CGCTAGTCGC GGGTAAACCC TCTGGCTTAG CGGTATTTGG CGATTGGCAA
ACGATTTACC CCGCCCTTAA GGATTTACCT GCTGAGGCTA AGGCCAGTTG GTTTGCCTTC
GATCACTACT ATTCTGATCA CGCCTTTCCA CAGATTTTAC CCTTAGTATT TGCCCATTCT
CCCAAACACT TAGTCGATAT AGGCGGAAAT ACGGGTAAAT GGGCACTAAG CTGCTGCGAG
TTTAATCCAG AGGTTGAAGT CACCCTGATG GACTTCCCCG GCCAATTAGC CGTAGCCAAA
GACAATGCCA CCAAGCATGG CTTTGCCGAG CGGATCCACA CCTTTGCCAC CGATTTGCTC
GATGAATCAC GCCCCTTTGT CGAAGGCGCC GATACCTATT GGATGAGCCA GTTCCTCGAT
TGCTTCTCTC AAGAGCAAAT CCTCAGCATC TTGCAACGCA CCGCTCAGGC GATGACGCCG
AACAGCCAGT TATTCATTGT CGAAACCTTC TGGGACAGAC AACCCTCTGC AGCCTCAGCC
TATTGCGTCA ATGCGACAAG CTTGTACTTT ACTGCGATGG CCAACGGTAA TAGCCGTATG
TACCACTCTA AGGACTTGAT AAAGTTACTA CATCAAGCGG GTTTATACGT CGATGAAGAC
ACTGACAACC TTGGTCTTGG GCATACTTTG CTGCGTTGTA AACGCAAACC CTAA
 
Protein sequence
MSFYHTPKAL SAFDAKFEAQ KIAFGPISFQ VAHCLLKFEV LATIDQAGEQ GLSIAQLAQT 
NVLNEYALGV LLDMGLSMGL VWLNGDAYVL DKTGYFLLHD DMAAINLNFV QDVCYQGLFQ
LDKALVAGKP SGLAVFGDWQ TIYPALKDLP AEAKASWFAF DHYYSDHAFP QILPLVFAHS
PKHLVDIGGN TGKWALSCCE FNPEVEVTLM DFPGQLAVAK DNATKHGFAE RIHTFATDLL
DESRPFVEGA DTYWMSQFLD CFSQEQILSI LQRTAQAMTP NSQLFIVETF WDRQPSAASA
YCVNATSLYF TAMANGNSRM YHSKDLIKLL HQAGLYVDED TDNLGLGHTL LRCKRKP