| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1533 |
|---|
| Symbol | |
|---|
| ID | 4477429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1785369 |
|---|
| End bp | 1788104 |
|---|
| Gene Length | 2736 bp |
|---|
| Protein Length | 911 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639726103 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_869173 |
|---|
| Protein GI | 117919981 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.0000000671911 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAACA AGACGACACA CCCACTGGCG AAGAAGGGCG TTAAGGCGAC ACCACGCCAC
CTTTGGCCGA GTAACTCCCA CAGGAATAAA GCTCAAAGTA AGGCGAATTG GCTGATGCCA
ACTGGGGTCG CCCTACTGAT GGCTTTTAAT CTCACGGGTT GTTTTTCTGA CGATGATCCA
GCACCAGAGG TCGTCACGCC CCCCGTAGTT CAGCCCCCTG AAACGGGCCC CACCTTCCCC
GAAGGCGCCA TCAAAATCCT TCGGGGGGAT AATCTCACCA CCCGTATTCA AGAAGCCTTA
ATCAACGCGC AAAGTGGCGC TGTGATTGTG CTACCAAAGG GCACCTTTAA TATCGATTCA
ACATTACTGT TCGATGGCGA CGTGGATGGG GATGGCAGTT ATGCCAAAAA CATCACTATC
ATGGGCTACG GGATGAAGGA CACTATCCTC AATTTCGCCC AAGCCAACTC GGGGGATGGG
ATTTTCGTGC AAAATGCGCT GAACATTACC ATTCAAGATA TGTCGGTCAA TGAGGCCAAA
AACAATGGCA TCAAGCTTAA AAATACCAAT GGCATCATAC TGCGCCGCGT GGGGGCGGTG
TGGGAAGGTG AGCTCGACAA AGATAACGGC GCCTATGGTC TGTATCCCGT TGAGTGTGAA
AACATTTTGA TTGAAGACAG CTATGTCCGA GGAAGTGCCG ATGCGGGGAT TTATGTGGGC
CAATCCCAAT ATATTGTGGT GCGCCGCAAT ATCGCCAAGG AGAACGTTGC CGGGATTGAA
GTCGAAAACT CTAAGTATGC CGATGTGTAT GACAACGAAG CCATGGGCAA CACTGGCGGG
ATTTTAGTGT TCGACTTGCC GATCAACAAC CACAGATACG GCTCTAGCGT GCGGATTTTC
AACAACAAAG TGTATGACAA CAACACGCCT AACTTCGCCA ACGCCTCGGC CAACCCCGCA
GGGGTGCATA TAGTGCCGCC AGGCACAGGG GTGATTGTGC TGTCGACCGC CGATGTGGAA
ATCTTCAATA ACGAAATTAC CCACCACGAT ACCTTAGGGG TGACTGTCAG CAGCTTCTTT
ATTGCAGAAC CCGACATGAC CTCCTTTGTC GGCAACTATG GGCAACCAGG TCAAGCCATT
GAAGATGGCT GGCGCCCAGT GCCGCGCAAT ATCTACTTGC ACGATAACGT GATCACTGAC
TATGGCAGCA AGCCTAAAGG CTATTTAATT CAAGATATTA TCCGCGCGTA TGTCATCAGT
CACGGCACCT TGCCCGGCGT GCTCTACGAT GGCTTAGGGG AAATGCTTGC CAATAACGGC
ACCGCCGCTT ACCTAGGTTT GAAAGAGGCA CCCTTTGCCA CAGATGGCAG CGATAACGTC
TGCGCCAGTG ATAACGGTGA TGTGTCCTAC GGCAGACTCT ATGCCAACAG CAACACCGAC
ATCAGTATCG CTGATGTGCA ATACGAGAAG ACTCAGAACA ACCTACTGAA ATGTACCCAG
GTGAGCCTAC CCGTGCACAC AGTCACCTTC GCGGGCCAAG TGTTTGGCTG CGGAGTTGAC
GATAATACAG CGGGTTGTGA TGGCGGCGTG CTCGTTGGCG GCGGAGGCAC TATCGGTGAA
GGCGAAGGTG GTTTAGTGGG TGATGGTGAC CAAAGTCTTT GTCAGGCGAC TGGGTCAAAC
GTCAGTTGGG ATGCGCTGCT AAAAGCAAAC TGCCCTAAAC TGTCGGACTA CAACCTGTTC
AGCGATGCCA AAAACCCTAC GACAGGGCCT AATTCGGGCG GTGTCCCTTA CGATCTTAAC
ACTCAGCTCT TTACCGACTA CGCCAGTAAA TACCGCTTTG TGTATTTGCC TTCGGGACAA
AAAGCCAGTT ACTCCGAAAA CGAAGCGTTT GATTTCCCTG TGGGTAGCGT TATCGTCAAA
ACCTTTGCCT TGCCAAGCAA CACCAGTAAG CGCGGGATCA GTAACGAGAG TTTGATTGAA
ACCCGTCTGC TAATCCATCG TCCAACGGGT TGGAGCGCCC TGCCCTATGT GTGGAATGCC
GATAAGACAG ATGCGACGCT GGCGAAAGCC GGTGCAATTA GCAGCCAAAC CTTAAGCCAT
AAAGGGGAAA GCCTCACCTT TAACTACATG GTCCCGAGCA TGAACCAATG TAAGCAGTGT
CACCAGTTTA AGGCCGATGA CAACAGCAAC GCCGTGTTTG TACCTATTGG TCCTAAGGCG
CGCCATTTAA ACCGCAACTA CAGCTATCAA GATGGCACCA TGAACCAACT GCTGAAATGG
GAAAGCCTAG GTATTTTGCA GGGATTACCA AATCTGAGCC AAGTACCACA AGTACCCGCC
TACCACGATG GTGACGAAGC CACAGTCGCA AGCTTAAGCG ATACCGCATT AATGCAAACG
GCTAAGGGTT ATCTCGACAT CAACTGTGCC CATTGCCATA GACCCGAGGG CAACGCCTCT
AACACCGGCC TTAAACTCGA GTACTGGCGT GGCTACAGCG ATGATGCGGG TTTCTCCCAC
GGTACCTGTA AATCGCCCGT CGCCTATGGT GGTGGAAACT TAGGTTTCGA CGTTGTGCCT
GGCAATGCCG CAGAGTCCAT CATGCACTTT AGAATGCAAA GCACGACCCC GGGCGATCGT
ATGCCTGAAA TTGGTCGCAG CTTATCCCAT GATGAAGGCG TGGCGCTGAT CAGTGAATGG
ATAAAACGCC TGCCCGCAGC AAGCTGCTCG CACTAG
|
|---|
| Protein sequence | MFNKTTHPLA KKGVKATPRH LWPSNSHRNK AQSKANWLMP TGVALLMAFN LTGCFSDDDP
APEVVTPPVV QPPETGPTFP EGAIKILRGD NLTTRIQEAL INAQSGAVIV LPKGTFNIDS
TLLFDGDVDG DGSYAKNITI MGYGMKDTIL NFAQANSGDG IFVQNALNIT IQDMSVNEAK
NNGIKLKNTN GIILRRVGAV WEGELDKDNG AYGLYPVECE NILIEDSYVR GSADAGIYVG
QSQYIVVRRN IAKENVAGIE VENSKYADVY DNEAMGNTGG ILVFDLPINN HRYGSSVRIF
NNKVYDNNTP NFANASANPA GVHIVPPGTG VIVLSTADVE IFNNEITHHD TLGVTVSSFF
IAEPDMTSFV GNYGQPGQAI EDGWRPVPRN IYLHDNVITD YGSKPKGYLI QDIIRAYVIS
HGTLPGVLYD GLGEMLANNG TAAYLGLKEA PFATDGSDNV CASDNGDVSY GRLYANSNTD
ISIADVQYEK TQNNLLKCTQ VSLPVHTVTF AGQVFGCGVD DNTAGCDGGV LVGGGGTIGE
GEGGLVGDGD QSLCQATGSN VSWDALLKAN CPKLSDYNLF SDAKNPTTGP NSGGVPYDLN
TQLFTDYASK YRFVYLPSGQ KASYSENEAF DFPVGSVIVK TFALPSNTSK RGISNESLIE
TRLLIHRPTG WSALPYVWNA DKTDATLAKA GAISSQTLSH KGESLTFNYM VPSMNQCKQC
HQFKADDNSN AVFVPIGPKA RHLNRNYSYQ DGTMNQLLKW ESLGILQGLP NLSQVPQVPA
YHDGDEATVA SLSDTALMQT AKGYLDINCA HCHRPEGNAS NTGLKLEYWR GYSDDAGFSH
GTCKSPVAYG GGNLGFDVVP GNAAESIMHF RMQSTTPGDR MPEIGRSLSH DEGVALISEW
IKRLPAASCS H
|
|---|
| |