| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0876 |
|---|
| Symbol | |
|---|
| ID | 4477087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 1021510 |
|---|
| End bp | 1022163 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639725412 |
|---|
| Product | dihydropteridine reductase |
|---|
| Protein accession | YP_868520 |
|---|
| Protein GI | 117919328 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.665426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.300688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATT TAAGTTTTCT CGCTAAAAAG CGTTACACCA CTAAGGCCTT TGATCCAACC
AAGACGATTC CTGCCGACAA GATTGCCGAA ATCAAGACCT TACTGCAATT CAGCCCATCA
TCGACCAACT CGCAGCCTTG GCACTTTGTT TTAGCTGGCA CGGCGGAAGG CAAAGCCTTG
ATCGCACAAG CGACCGAAAA CTACGCCTTC AATACTCAAA AAATTCTCAA CGCTTCCCAT
GTAGTCGTGC TGTGTACACG CACACAACTC GATGAAGCCC ATTTGCTGCA AGTGCTAGAG
CAAGAAGCCA AAGATGGCCG CTTTGCCAGT GAAGAAGCCA AGCAAGGTCA ACATAATGGC
CGCTCTTTCT TCGCCAATAT GCACAAATAT GAGCTAAAAG ACGCCCAGCA CTGGATGGAG
AAGCAAGTGT ATTTAGCACT GGGTACCATG ATGTTGGGCG CAAGTGTGCT CGATATCGAT
GCCTGTCCTA TCGAAGGTTT CGATGCGGCT AAACTCAATC AAGTCTTAGG CTTACGCGAA
AAAGGCCTGT GCGCCTCTGT AGTGGTCGCT CTAGGTTATC GCTCCGAAGA AGATTTTAAC
GCTAAGTTAC CTAAGTCACG TTTAGCGCAA GAGGTTATCT TTACCGAGAT CTAA
|
|---|
| Protein sequence | MSDLSFLAKK RYTTKAFDPT KTIPADKIAE IKTLLQFSPS STNSQPWHFV LAGTAEGKAL
IAQATENYAF NTQKILNASH VVVLCTRTQL DEAHLLQVLE QEAKDGRFAS EEAKQGQHNG
RSFFANMHKY ELKDAQHWME KQVYLALGTM MLGASVLDID ACPIEGFDAA KLNQVLGLRE
KGLCASVVVA LGYRSEEDFN AKLPKSRLAQ EVIFTEI
|
|---|
| |