| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_0645 |
|---|
| Symbol | |
|---|
| ID | 4476855 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008577 |
|---|
| Strand | - |
|---|
| Start bp | 762022 |
|---|
| End bp | 763014 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 639725180 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_868289 |
|---|
| Protein GI | 117919097 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.17227 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000224938 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATACAT CAGCAACAAA CAGAAGACTT CGAGTTTTAT TAACAGCAAT AAGTAAAGAA
ATATTAGTTC CTCAGCCGGA ATTTCAGCGT AGGTTAGTTT GGTCAAATAA AGATAAAGTT
GAGTTTGTAA AAACAGTACT TGAAGGATAT CCGTTCCCTG AAATATATAT TGCAGCAGGA
AACGTAGACC CAAAAACCGG TGAAGGCTGC GAGCTTCTTG TTGATGGCCA GCAAAGAATT
ACAACTCTTT ATCAGTATTT TAAAGATTCA CCAGATTTAA AACTACCAGC TAATGTGCCT
AGTTATGCTG AGCTTGAAGA AGCTAAGCAA ATAGAGTTTC TCGAATATGA AGTTGTAGTT
AGAGATCTTG GAAATAAACC CATAGAAGAC ATAAAAGAAA TATTCCAAAG GATTAACTCA
ACTAGTTACG GATTGAATGC CATGGAAATT CATAATGCTA GATATGGCGG CGAGTTAAAA
AAATTTGCAG AGGATATGTC TCAGAAGGAT TTTTTTGATC AGCACAAAAT TTTTAATACA
ACAGACATAA AACGTATGAA CGATACTAGG TATTGCTTAG CTTTAATTGT AACAATGATG
AGCACATACT TTAATCGTGA TGGGGAAATT GAATCCTACC TTGAACGGTA CAACGAGTTT
TTTGATGAAA AAGAAAAGTA CAACTCTCAA ATTGATGAAG TTCTAAAAAC TATCACACAA
TTGAATTTCC CTTCAGATTC TCGCTCCCTA AAGAAAGCTG ATTTTTTCAC TCTATTTATC
GAAATTCATA AAGCTATTTA TAAATTAGGT AAAAGCATAA ATATTGCTAA CTTGCGTTGT
AATCTTGATG ACTTCTATGA TCGTGTAGAT AAAGCTGCAG CTGAAGAAAT TAATGATGAA
GTGGCCGAGA AATATTATAA GTCAGCATTA CAAGGTAGTA ATAATCGTAG TAATCGAGCA
TTACGTGGTG AGATCGTTCA AGAGCTGATT TAG
|
|---|
| Protein sequence | MNTSATNRRL RVLLTAISKE ILVPQPEFQR RLVWSNKDKV EFVKTVLEGY PFPEIYIAAG
NVDPKTGEGC ELLVDGQQRI TTLYQYFKDS PDLKLPANVP SYAELEEAKQ IEFLEYEVVV
RDLGNKPIED IKEIFQRINS TSYGLNAMEI HNARYGGELK KFAEDMSQKD FFDQHKIFNT
TDIKRMNDTR YCLALIVTMM STYFNRDGEI ESYLERYNEF FDEKEKYNSQ IDEVLKTITQ
LNFPSDSRSL KKADFFTLFI EIHKAIYKLG KSINIANLRC NLDDFYDRVD KAAAEEINDE
VAEKYYKSAL QGSNNRSNRA LRGEIVQELI
|
|---|
| |