| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3821 |
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| Symbol | |
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| ID | 4922826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4548685 |
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| End bp | 4551297 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640165450 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095946 |
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| Protein GI | 127514749 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0310113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAA GGAAGCCGAT ATTAACTTTT TATGAGCCTA AGAAAGATTT ACAACGTAAT
AAGTTACCTA ATCCTGTTGG TAGTGAGTTG CATGGGCCTG GTATTGCAGC ACAAGCCAAC
AAGATATTTC CTAAAATTGA GGAGCTTACA AAAAAGTTTT CGGAAAATAT TCATTTATCT
GATACGCCAG ATGGAATGTT GCCAGAGAAA GTTCTGGTGT TGGAAATCGC GGGTAATATT
CAAAATCTAG CAAATGCCCT ATCAAAAGTT CCTGGGTTTG AGGTTCTTTC TGAGTACATT
ATTGATAGCG ATTTCCAAGA CGAAGAATAC TATTTATTAA ATAAAGATAA AATAAAGCCA
TCTGGTAAAA ATGCTTATTT AACAATGAGT AATCAGGCTG GATTGGCATC GCTACATGCG
ATGTGGCGAA AGTTTAAAGA ATCAGGCTAT ATCGAGGTTG GTTTTACGCC TTTAAGAGAG
GCATTTCTTC AGCTTAATGA CATACGTTTT TGGGAAACTA AGGACCGATT AGCGAATACA
TACCTACTTG AAGATTGGCA ATATCGCTTA GAAGATGCAG CACAAGGATT TGGTCAGAAT
GTTTCTTTTG AAATCGAGCT TTGGTATAGA ACATCTGGTG ATTTGCGCGC AAAGGCGGAG
GGATATATTC GGCGTGTCAT AAGTGCATGT GGCGGTGAAA TTTTAGGTGG TTTTGTTCAT
GACGGTATCA GTTACCACGG ATTAATCGGT CGTTTACCTA TAGAACAAGT TCAAGCGGTC
GTTGAAACTG CTGGTGCGGC TCTTGAACTG ATGCGTTGTG ATGAAGTTAT GTTTTTCAGG
CCATTAGGTC AATGTGCCAT GCCTGTAAAT AATGACTCTC TTGAAGAAAG TGTAAAGTTT
GAGCCTTTGG TATTTGAGCA GCAGCAGCCA ATTGTTGCCT TGTTGGATGG GTTGCCTCAA
GCAAATCATG AAGCATTGCG AGAAAGAATT TGGGTTGATG ATCCTGATGA TTTTGAATCC
TTATACCAAT CGCGATCTGA ACATATGCAT GGTACTTCAA TGGCATCGAT CATTATCCAT
GGTGATCTTA GTCAGAGAGG GGAACTTTCC TTAGATCGCC CGTTATATGT AAGGCCAATA
TTGGCGCCGG AACATCAACA ACTCAATGGA ACCCGAGTTG AGCAAATACC ATCAACTTAC
TTACCTTTAG ATCTCGTACA CAGAGCGGTA AAGCGGATTA AAGAAGGTGA AAACGGCAGT
GGTCCCGTTG CCCCTGAAAT TGTAATTATC AATTTATCGG TGGGTGACCC ATATCGTTTA
TTTGATACCC AGATGAGTCC TTGGGCCAGA ATGATCGATT GGTTATCGTT TAAATATGGC
GTTCTGTTTG TTGTTAGTGC AGGCAATATG TCACAAAGCC TTCTCTTAGA AGGCGTGACC
GAACATGACT TCAGACTTCT TTCTCCTGAC GAAATCGAGG CTCATGCTAT AAATGCTATT
GCTAAGCAAA AATTTGAACG CCGTATGATG TCTCCCGCCG AGGCCATAAA CGTTTTGACG
GTGAAATCGT CTCATGCTGA TTGTTTTGAT GGAAATCTCC CACCTAATCA AATAGATGTT
TTTTGTTCTG AAGGCATGTT TAGCCCAATC AACCCTATTA CACTTGGTAA AAAGAACTCT
GTTAAGCCAG AGGTATTAAT GCCTGGTGGA AGACAAACCT ACATAAATAA AACGCTTTTA
GCTAAAGATG ATGTCGTTTT AGCTGTTTCA CAAACCAATA GATTTGGCCC TGGCGTTAAG
TCTGCACTAC CGTCGTCGTC GCCTGGGGAT GTTAGTAGTT ACGGCTTTAC ATCTGGTACT
AGCAATGCTG CCGCGTTAGC TTCTCGTCGG CTGGCGTTTC TATATGAAAC ATTGCAGGAA
ATAAAAGAAC TGGGTGACGC GAGTGCATTA TCCTTTGCTC CTGACTCCGT AATTCTTAAG
GCTCTGTTTG TTCATGGCGC TGAACACCTT GAGCAGACAA AGGAAGTCAT TACAAAACAT
CTAAAAAATA AAAGTAATAG TAGAATTTTT AAGTCTGAGT TGAATCAATA TCTTGGATTT
GGTGTTGTTA ATGAAAACCG AATTCATGGG TGCCAATCAA ATCAAGCTAC ATTGATATAC
ACGGGAGTTG TACGAGATGG TGAAGCCCAT GAGTATGAGT TGCCTCTTCC ACCAAGTCTC
GCTGCAAATA CTGCTAATCG TCGTTTAATT GTAACCGTTG CATGGATGGC TCCAGTTAAT
CATGGTCATC AAGATTATAG AGGCGCACAG CTGTGGGCAA CGCCGGCATC TAAATTAATC
AATGCAAACG ATCCTGACTA TTACTTTCAT CACTTGAAAA ATGGAACCGT TTTTCATGAG
GTTCGGTTAG GTGCTAAGGC CGCGAGTTTT ACGAAAGGCG ATAAGTTGGC TATACAGCTT
CACTGCAATG CTAGAGCTGG ATTTGATGGA CTAGAAGTTC CATATGCTCT TGTTGTTACA
TTGGACACTC CTGGAACCGA CCTACCTATA TATGAAGAAG TGAAAAATGA GCTGGAATTG
ACGGTGTCGT CGAAACAGAG CCAGAATGCA TAG
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| Protein sequence | MMERKPILTF YEPKKDLQRN KLPNPVGSEL HGPGIAAQAN KIFPKIEELT KKFSENIHLS
DTPDGMLPEK VLVLEIAGNI QNLANALSKV PGFEVLSEYI IDSDFQDEEY YLLNKDKIKP
SGKNAYLTMS NQAGLASLHA MWRKFKESGY IEVGFTPLRE AFLQLNDIRF WETKDRLANT
YLLEDWQYRL EDAAQGFGQN VSFEIELWYR TSGDLRAKAE GYIRRVISAC GGEILGGFVH
DGISYHGLIG RLPIEQVQAV VETAGAALEL MRCDEVMFFR PLGQCAMPVN NDSLEESVKF
EPLVFEQQQP IVALLDGLPQ ANHEALRERI WVDDPDDFES LYQSRSEHMH GTSMASIIIH
GDLSQRGELS LDRPLYVRPI LAPEHQQLNG TRVEQIPSTY LPLDLVHRAV KRIKEGENGS
GPVAPEIVII NLSVGDPYRL FDTQMSPWAR MIDWLSFKYG VLFVVSAGNM SQSLLLEGVT
EHDFRLLSPD EIEAHAINAI AKQKFERRMM SPAEAINVLT VKSSHADCFD GNLPPNQIDV
FCSEGMFSPI NPITLGKKNS VKPEVLMPGG RQTYINKTLL AKDDVVLAVS QTNRFGPGVK
SALPSSSPGD VSSYGFTSGT SNAAALASRR LAFLYETLQE IKELGDASAL SFAPDSVILK
ALFVHGAEHL EQTKEVITKH LKNKSNSRIF KSELNQYLGF GVVNENRIHG CQSNQATLIY
TGVVRDGEAH EYELPLPPSL AANTANRRLI VTVAWMAPVN HGHQDYRGAQ LWATPASKLI
NANDPDYYFH HLKNGTVFHE VRLGAKAASF TKGDKLAIQL HCNARAGFDG LEVPYALVVT
LDTPGTDLPI YEEVKNELEL TVSSKQSQNA
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