| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3630 |
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| Symbol | |
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| ID | 4922383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4328079 |
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| End bp | 4328858 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165252 |
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| Product | bioH protein |
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| Protein accession | YP_001095755 |
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| Protein GI | 127514558 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGC AATCCTTGCA TATTGAAACT ATAGGCCAAG GCCGCCCCAT CGTCCTGCTG
CACGGCTGGG GGGTGAATAG CGCCGTCTTT ACCCCCTTGC ATCACACGCT CAAAGATCAT
CAACTCCTGT TAGTCGACCT GCCCGGCTTC GGCGATAGCC CGGCCATAGA GGGAGACCTG
GATGCTTGGG TCGATCATCT CATGGAACAG TTGCCAGAGC GGGCTATCTG GGCCGGTTGG
TCACTAGGGG GACTGGTCGC CACCCGCGCC GCCCTGCGCT ATCCAGAGCG CATCAATGCC
CTGCTGACCA TAGCCTCCTC CCCTTGCTTC ATGGCGCGGG ATAACGAGGG CTGGCCGGGG
ATTCCACCAC AAATTCTGGG GCAGTTTGGC GATCAGCTGG AGAAAGATCT CGGCAAGATG
ATAGAGCGTT TCCTGGCCAT CCAGGCCATG GGAAGCGAAA CCGCCAAGCA GGATATCAAG
CAGCTCAGGG ACTTGGTGAT GGCCAAGCCG CTGCCGGATG CAGACGCGCT ACGCGCCGGC
TTGCAGATGC TTAAGGAGGT GGACCTCAGA GACCAGCTCA ATGAGATACG CGTGCCCTGG
CTCAGGGTGT GGGGAAGGTT GGACGGTCTG GTGTCACGCC GGGTACAGCC GCTGATGCCG
GTTTGCGAGT CACGCTTTGT GGATTTCGTG CTGCCTAAGG CCTCCCATGC GCCCTTCTTC
TCCCACAGGG ATGCCTTTGT TCAAGGGGTC GAGGCCTGGC TGCAGACGCT TAAAGAATAA
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| Protein sequence | MSQQSLHIET IGQGRPIVLL HGWGVNSAVF TPLHHTLKDH QLLLVDLPGF GDSPAIEGDL
DAWVDHLMEQ LPERAIWAGW SLGGLVATRA ALRYPERINA LLTIASSPCF MARDNEGWPG
IPPQILGQFG DQLEKDLGKM IERFLAIQAM GSETAKQDIK QLRDLVMAKP LPDADALRAG
LQMLKEVDLR DQLNEIRVPW LRVWGRLDGL VSRRVQPLMP VCESRFVDFV LPKASHAPFF
SHRDAFVQGV EAWLQTLKE
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