| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3413 |
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| Symbol | |
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| ID | 4923567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4064708 |
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| End bp | 4066009 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165025 |
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| Product | phosphoribosylamine--glycine ligase |
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| Protein accession | YP_001095538 |
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| Protein GI | 127514341 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
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| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.872928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTAT TAGTAATAGG TAGCGGCGGA CGCGAACACG CCCTGGCCTG GAAGGCCGCT
AAGTCACCCC TGGTCGAGAA AGTCTTCGTG GCGCCGGGCA ACGCCGGCAC AGCGCTGGAG
CCTAAGCTTG AGAACGTTTC GATTGCCGTC GAAGCCATCT CTGAGCTGGT AAGCTTCGCC
AAGGAGCAGG CGATCGAACT GACTATCGTC GGCCCGGAAG TGCCGCTGTC ATTGGGCGTG
GTCGATGCCT TCAACGAAGC TAAGCTACCT ATCTTCGGTC CAACCCAAGG TGCGGCGCAG
CTAGAGTCTT CTAAGGCGTT CACCAAGGAC TTCCTGGCCC GTCACAACAT TCCGACGGCG
GCCTACTCGA ACTTCACCGA GATCGAGCCT GCCAAGGCTT ACGTTACCGA AGTCACCGCC
AACACTGGCT TCCCCATCGT CATCAAGGCC GACGGCCTGG CGGCGGGTAA AGGGGTGATC
ATCGCTCAAG ATCAGGCCGA AGCCGATGCG GCTATCGAAG ATATGCTGGC CGGTAACAAG
TTTGGCGAGG CCGGTTCTCG CGTGGTGATC GAAGAGTTCC TGAAAGGCGA AGAAGCCAGC
TTCATCGTCA TGGTCGATGG CACAAATATT CTGGCTATGG CCAGCAGCCA GGACCATAAG
GCCAGAGACA ATGGCGACAA CGGCCCAAAC ACGGGCGGCA TGGGCGCCTA CTCTCCGGCG
CCAGTGGTGA CACAAGCGGT TCACGACTGG ACTGTTGAAA ACGTCATTCG TCCAACCGTA
GATGGCATGG CTGCTGAAGG TAATGTCTAC ACAGGTTTCC TCTACGCCGG TCTGATGATT
GCGCCAGATG GCAGCGCCAA GGTACTGGAA TACAACTGCC GCTTCGGCGA CCCTGAGACC
CAGCCTATCA TGATGCGTCT TCAGTCAGAT CTGGTCGAGC TCTGCCTGGC CGCCACCCGT
GGCGAGCTGG ACAAGGTGAC CGCCGAGTTC GACAGCCGCG CCGCTGTAGG CGTGGTGATG
GCTGCCGGTG GCTACCCAGA TACCTATCGC AAGCACGATG TGATCGAGGG ACTCAGCCTA
GGCAGCGATG ATGCCAAGGT GTTCCACGCG GGCACCAGCA TGAAGGATGG CCATGTGGTC
ACCAATGGCG GCCGCGTCTT GTGTGCCACC GCCCTGGGCC AAGATGTGAC TAAGGCGCAG
CAGCGTGCCT ATCAACTGGT CAATGAGATC CACTGGGATG ACGTCTATTT CCGTACCGAT
ATCGCCTATC GCGCCATCGC CCGGGAAAAC GAGCAGGCCT AA
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| Protein sequence | MNVLVIGSGG REHALAWKAA KSPLVEKVFV APGNAGTALE PKLENVSIAV EAISELVSFA
KEQAIELTIV GPEVPLSLGV VDAFNEAKLP IFGPTQGAAQ LESSKAFTKD FLARHNIPTA
AYSNFTEIEP AKAYVTEVTA NTGFPIVIKA DGLAAGKGVI IAQDQAEADA AIEDMLAGNK
FGEAGSRVVI EEFLKGEEAS FIVMVDGTNI LAMASSQDHK ARDNGDNGPN TGGMGAYSPA
PVVTQAVHDW TVENVIRPTV DGMAAEGNVY TGFLYAGLMI APDGSAKVLE YNCRFGDPET
QPIMMRLQSD LVELCLAATR GELDKVTAEF DSRAAVGVVM AAGGYPDTYR KHDVIEGLSL
GSDDAKVFHA GTSMKDGHVV TNGGRVLCAT ALGQDVTKAQ QRAYQLVNEI HWDDVYFRTD
IAYRAIAREN EQA
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