10 homologs were found in PanDaTox collection
for query gene Shew_2657 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009092  Shew_2657  hypothetical protein  100 
 
 
421 aa  842    Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3194  hypothetical protein  52.04 
 
 
431 aa  439  9.999999999999999e-123  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1432  hypothetical protein  51.44 
 
 
425 aa  411  1e-113  Shewanella woodyi ATCC 51908  Bacteria  normal  0.440324  normal 
 
 
-
 
NC_009784  VIBHAR_05404  hypothetical protein  46.62 
 
 
419 aa  354  2e-96  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001467  hypothetical protein  46.98 
 
 
366 aa  346  5e-94  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1692  hypothetical protein  27.16 
 
 
381 aa  82  0.00000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.12804  normal 
 
 
-
 
NC_012849  Rpic12D_5304  hypothetical protein  27.16 
 
 
381 aa  82  0.00000000000002  Ralstonia pickettii 12D  Bacteria  normal  0.374361  normal 
 
 
-
 
NC_013501  Rmar_2537  hypothetical protein  31.68 
 
 
374 aa  54.3  0.000004  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2376  hypothetical protein  25.2 
 
 
413 aa  49.3  0.0001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.0000000199607  n/a   
 
 
-
 
NC_007520  Tcr_0432  hypothetical protein  21.13 
 
 
408 aa  47.4  0.0005  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
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