| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_2556 |
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| Symbol | |
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| ID | 4921096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 3012950 |
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| End bp | 3013813 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640164150 |
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| Product | acyl-CoA thioesterase II |
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| Protein accession | YP_001094681 |
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| Protein GI | 127513484 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAGG TGTTAGATGA TCTGTTATCC CTTTTATCGC TGGAACAGAT AGAGGTAGGC
CTCTATCGGG GTCAGAGCCA AGATCTGGGC TTCGGCCATG TGTTTGGCGG ACAGGTCATG
GGCCAGGCCC TTAGCGCCGC GGCGCAAACC GTCGATAGCG AACGTCAGGT ACACTCCTTC
CACTCCTATT TTCTGCGCGC CGGTGATGAG AAACAACCCA TAGTCTATGA CGTGGAAAAT
ATGCGCGACG GCGGCAGCTT TAGCGCCCGC AGGGTGAAGG CGATTCAGAA GGGCAGACCC
ATCTTCTACA TGACCTGCTC CTTCCAGAAG CCCGAGCAAG GGTTAAATCA CCAGAGCAAG
ATGCCGGATG TACCGGGCCC TGAGGGCCTG CTCAATCAGC AGGAGCTGGC CTCGACCCTG
AGGGACAAGG TGCCTCGTAA GGTGCTGGAG AAGTTTATGG CGGACTCGCC GCTTGAGATG
CGCCTGGTTA ATCCATGCAA TCCCATGGAA CCCAACCAGA GCGAGCCCAT CAGGCATGTG
TGGATCCGCG CCAATGGCAA GGTGCCCAAG GATCTCTCGG TGCATGAGTA TCTGCTGGCC
TACGCCTCAG ACTTTAATTT CCTGGTGACG GCGGCGCAGC CCCACGGCGT CTCCTTCTTA
ACCCCGGGCA TGCGCATGGC CACCATAGAT CACGCCATGT GGTTCCACCG TCCGCTGGAT
CTCAGCCAGT GGCTGCTCTA TAGCATAGAT AGCCCCAATG CAGGTGGCGG CCGCGGCTTT
GTGCGCGGCG AGTTTTACAC CCAAAGTGGT GAGCTGGTGG CCTCGGCGAC CCAGGAAGGC
TTGATTCGAT TAACACAGGG ATAA
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| Protein sequence | MSQVLDDLLS LLSLEQIEVG LYRGQSQDLG FGHVFGGQVM GQALSAAAQT VDSERQVHSF
HSYFLRAGDE KQPIVYDVEN MRDGGSFSAR RVKAIQKGRP IFYMTCSFQK PEQGLNHQSK
MPDVPGPEGL LNQQELASTL RDKVPRKVLE KFMADSPLEM RLVNPCNPME PNQSEPIRHV
WIRANGKVPK DLSVHEYLLA YASDFNFLVT AAQPHGVSFL TPGMRMATID HAMWFHRPLD
LSQWLLYSID SPNAGGGRGF VRGEFYTQSG ELVASATQEG LIRLTQG
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