Gene Shew_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_2536 
Symbol 
ID4921241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp2994546 
End bp2995016 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content57% 
IMG OID640164130 
Productputative thiol-disulphide oxidoreductase DCC 
Protein accessionYP_001094661 
Protein GI127513464 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAAAAA CGAGGAGTCA GCGAATTAAC AATCAACACA CTGACATTGA GGACAGAGCC 
CAGCTGGGGG ATCGCTATCC TTTAGTGATC TTCGATGGCA GCTGTAACCT GTGCCACGGC
GCGGTGCGCT TTATCGTCAG GCGCGACAGG CGCGAGCATT TCAAATTCGC CTCGATTCAG
AGCGAGACGG CCCAGCGGCT GTTGGCAAAT CGTGGGATAA ACGTGGACCT TGAGGATCTC
AGCAGCTTTT ATCTGCTTGA TGAGCAGGGC GTGTTAGCCC AGAGCGAGGC GGCGCTGGCG
GTGGCAAGCA AGCTCGATGG CCTCTGGCCC CTGTTAAGGA TATTGAAAGT GCTGCCCAGG
GGCCTGCGAG ACTGGGGCTA TCGGTTGATA GCTAACCGGC GTTATCGTCT GCTTGGTCGC
AGAGCCTGCG CCCTGCCATC CGAGGTAGAC AGGGGCAGAT TTATCGAGTG A
 
Protein sequence
MAKTRSQRIN NQHTDIEDRA QLGDRYPLVI FDGSCNLCHG AVRFIVRRDR REHFKFASIQ 
SETAQRLLAN RGINVDLEDL SSFYLLDEQG VLAQSEAALA VASKLDGLWP LLRILKVLPR
GLRDWGYRLI ANRRYRLLGR RACALPSEVD RGRFIE