| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1787 |
|---|
| Symbol | |
|---|
| ID | 4921262 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 2044776 |
|---|
| End bp | 2046161 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640163348 |
|---|
| Product | putative chaperone |
|---|
| Protein accession | YP_001093912 |
|---|
| Protein GI | 127512715 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0443] Molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.572185 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTTG GATTCGATTA TGGCAGCGCC AATTGCGCCG TCGGCATTAT GGAAGGCGAA
AGGGTGCAGC TGCTGCCCCT GGCGGGGGAT TCTCACTACC TGGTATCGAC CCTGTATGCC
TTCGACCGTG AGTTGATTGC CGAGGCCGTC TATCAGCAGC TAGCTGGTGA ATTGAAGGCC
GATTATGCCA AGCTGCGCTC GGCGCAGCTG AGCCGCGCCC GCCATGCCCG TCAGGCGCTG
GATCTCGACG GTGATGAGCA GGCGGTGTTT GTCGGTGAGC AGGCAGTGGC CCATTATCTT
GAGATGCCCG AAGAGGGCTT CTATGTGCGC TCGCCCAAGT CTTTCCTGGG GGCAACCGGT
CTGCGAGCGG ATCAGATAGC CCTGTTTGAA GATATCGTCA CCCTGATGAT GATGCATATT
AAGAGCTTAG CGGATAAGCA GTTGGGGGCT AAGGGAAGTG CTACTCATGC GGTGATCGGT
CGTCCGGTCA ACTTTCAGGG CATAGGCGGC GAGGAGAGCA ATCGTCAGGC CGAAGCCATC
CTGGCACTGG CGGCTAAACG CGCCGGTTTC ATCGAGGTGA GTTTCCTGTT CGAGCCCTTG
GCGGCGGGGA TGGATTTCGA AGCTAGCCTG ACCCAGGATA AGACAGTGCT GGTGGTGGAT
GTGGGCGGCG GCACCACAGA CTGCTCTGTG GTGAAGATGG GGCCCTCTCA TATTGCTAAG
GCCGATCGCA GCGAGGATTT TCTCGGCCAT AGCGGCCAGC GCATCGGCGG TAACGATCTG
GATATCGCCC TGGCGATGAA GGCCTTCATG CCCCACCTTG GGCTGGGGTC TCAGATGGTC
AATGGCCTGC CAGTGCCCAG CCAACCCTTC TGGAATGCGG TGGCGGTCAA CGACATCAGC
GCGCAGCGTG ACTTTGCCAG CCTGACCAGT CGCAAGATGA TAGAGGAGCT GATCAAGGAT
GCCGAGCGCT CGGATCTGCT GTCGCGCCTG CTCAAGGTGC AACGGGATCA GCTAGGCTAT
CGGTTGGTTC GCAGCGCCGA GGGGGCGAAA ATTGCCCTGT CAGATAATGC GGCTACTCAA
TCGAGTCTGG ATTATGTCGA TGCTGCGCTG GTTGCCGAAG TCGATCAGCA AGGCTTCGTC
GATGCGATCG CTCAGCCTGT GGGCTTGATC CAGTCCTTAA TGGCTGAGGC AATGGCCAAA
GCAACAGATA AGGCGACGGA CAAGGCGCAG GCCGATATTA TCTATGTCAC TGGCGGTACG
GCCAAGAGCC CGGCAATTTA CCAGAAGATT GCCCAGATGT ATCCTGAGAC TGAGATAGTG
GTCGGTGACC ACTTTGGCAG TGTGACCGCC GGACTAACCC GCTGGGCGCA GAAGGTATTT
GGCTAA
|
|---|
| Protein sequence | MFVGFDYGSA NCAVGIMEGE RVQLLPLAGD SHYLVSTLYA FDRELIAEAV YQQLAGELKA
DYAKLRSAQL SRARHARQAL DLDGDEQAVF VGEQAVAHYL EMPEEGFYVR SPKSFLGATG
LRADQIALFE DIVTLMMMHI KSLADKQLGA KGSATHAVIG RPVNFQGIGG EESNRQAEAI
LALAAKRAGF IEVSFLFEPL AAGMDFEASL TQDKTVLVVD VGGGTTDCSV VKMGPSHIAK
ADRSEDFLGH SGQRIGGNDL DIALAMKAFM PHLGLGSQMV NGLPVPSQPF WNAVAVNDIS
AQRDFASLTS RKMIEELIKD AERSDLLSRL LKVQRDQLGY RLVRSAEGAK IALSDNAATQ
SSLDYVDAAL VAEVDQQGFV DAIAQPVGLI QSLMAEAMAK ATDKATDKAQ ADIIYVTGGT
AKSPAIYQKI AQMYPETEIV VGDHFGSVTA GLTRWAQKVF G
|
|---|
| |