Gene Shew_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_1554 
Symbol 
ID4922747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp1784670 
End bp1785014 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content48% 
IMG OID640163116 
Producthypothetical protein 
Protein accessionYP_001093680 
Protein GI127512483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.83721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGTT TCAAGTACCA CTTTAATCAG GATTTAGTGG AGTTACAGGC CAGTAACTGG 
ATAGGCTTGG AGCAGGTATT TGTTAACGGC AAGCGGGTCT CGCGTAAGCT GAATTTCGGC
CCCAAGAGCG AACATGAGGT GCAGCTGCAC AGCGGCGATC CCTGTAAGTT TCAACTCTTT
ATCGATCCCA ACAGCGAGCA GATGATCTGC CGCATCTACA AACAAAACCG CCTGATCACA
AGCATCAAAC AGGGAAAGGA AAACCTGATG CAGAGTCGTC TTTTGCTGCA ATCTGTCATC
ATAGTAATGG CCGTCTCGAG CCTGGGCATG TTGCTGGTGG TGTAA
 
Protein sequence
MISFKYHFNQ DLVELQASNW IGLEQVFVNG KRVSRKLNFG PKSEHEVQLH SGDPCKFQLF 
IDPNSEQMIC RIYKQNRLIT SIKQGKENLM QSRLLLQSVI IVMAVSSLGM LLVV