| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1151 |
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| Symbol | |
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| ID | 4921319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1325148 |
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| End bp | 1325852 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640162686 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001093281 |
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| Protein GI | 127512084 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0260064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0786224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGATA TGAGTGGTCC AAGGGCCTTT GCCCACAAAA TGCCGATTAG AAGCAGTTCG
TTTGCCATTA AGCTGAGCCT AGGCTTAATC TGTGTTGTCT GCGGCTTATG CATCAGTGGC
GCCGCGCTGG CTCTTGGCTG GATCGATAGC GATTTAGATG GCGTGCCAGA CAGTAAAGAT
GCCTGCCCGC ACTCTCGCCC CAATGCCGTG GTCGATGCTA AGGGCTGCGA GATAAGGCGA
GGTGAAATAG CTTGCATCGC GCCCGAGGGA GAGCTGCTGA GCTTTTGTGA GCCTGCCGCT
CAGAAAGCCC AATATGGGCA AGCCAGACAG AATAAGCAAG ACGAGCAGGT TAAGAGGTCG
ATAGGCGAGT CCAATGTCGT GCGCGTCTAC TTTGCCTTCG CCAGTGCCGA GGTGAGTATC
GACCAGTGGC CGCAACTGGC CAAGGTGCGC GACTTTCTTA GCGCGAGTGA TGCAAGGCTC
ACCCTGGTCG GGCATACGGA TAATATAGGC AGCGAGGCGG TGAATCTTAG TTTGTCACGC
CAGCGCGCCG AGCGGGTGAA ACAGATTTTT GTTCAAGATT ATGGTGTTAA GGCGGAGCGA
CTGTCGATAG TCGCCAAAGG TGCCAGTCAG CCCGTGACCG ATAACTTTGG TCCTGGCGAG
CGGGCCTTGA ATCGTAGAGT CGAGTTTATA GTTGAGGCCA GGTAA
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| Protein sequence | MTDMSGPRAF AHKMPIRSSS FAIKLSLGLI CVVCGLCISG AALALGWIDS DLDGVPDSKD
ACPHSRPNAV VDAKGCEIRR GEIACIAPEG ELLSFCEPAA QKAQYGQARQ NKQDEQVKRS
IGESNVVRVY FAFASAEVSI DQWPQLAKVR DFLSASDARL TLVGHTDNIG SEAVNLSLSR
QRAERVKQIF VQDYGVKAER LSIVAKGASQ PVTDNFGPGE RALNRRVEFI VEAR
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