| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0863 |
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| Symbol | |
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| ID | 4920652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 984547 |
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| End bp | 985575 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162396 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001092994 |
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| Protein GI | 127511797 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACAC TTACCATAGA ACAGGTTCAC AGCGATTATC AGGGGCAGAC GATTCTGCGC
GGCTTAGATC TTGTGCTGCA TCAGGGAGAA ATTGCCGCCC TGCTCGGCCC AAGTGGCTGT
GGCAAGACCA CGCTCCTCAA GGCGATTGCT GGGCTGCAGC CTATCTCCCA AGGGCGTATC
AGCATCAATG GCCGACTGCT CTCTGGACCC GAGACGTTTG TGCCCAGCGA GCGGCGAGAG
GTCGGGATGA TTTTCCAAGA CTACGCCCTG TTTCCTCACC TGACAGTGGC CGAGAATATC
TTGTTCGGGG TGAAAGGCTT GGATAAGGCT GCCAGACAGG CGAGGCTGGG TGAGATGCTG
GCGCTGGTGA AGCTAGAGGG CTTAGGGGGC CGTTATCCTC ACGAACTCTC GGGGGGTCAG
CAGCAGCGGG TGTCGATTGC CCGGGCGCTT GCTTATGAGC CAGAACTTCT GCTGCTCGAT
GAGCCCTTTT CCAATATCGA CGCTAAGGTG CGCGGAGAGA TGATGGTGGA GATCCGCGAG
ATCTTAAAGC AGCGCGGAGT AAGTGCCGTG TTTGTAACCC ACAGCAAGGA TGAGGCCTTC
GTGTTTGCCG ATAAGCTGGC TCTCTTCAAG GATGGGGGCA TAGCCCAATA TGGCAGTGCT
GAGAGCCTCT ACGCCGAGCC AACGGATAAG TATGTGGCGG AATTCCTCGG TCAGGTGAAC
TATCTTAGCT GTGAGGTGAA AGATAGGGCC CGGTTACAGA CCCTGCTGGG TGAGGTACAA
AGCAGCAGTG ATTTGCCCAA AGCGGCCGGA TATCGCGGCG AGCTCCTGCT GCGTCCGGAG
CAGCTGCAGA TGGCAGGAGA TGAGCAAGGT GAGGGCACTA TAATAGCGCG GCGCTTCCTC
GGTAATCTGT GCCACTACAG CATCTTGATT GGCGAGGAGA TATTGGCAGT GCGCTCGCCC
CTGCACCATT TTAGCCCTGG GCAGAAGGTT GGCCTGTCGG TGACGCCTCA TCCGGCGGTG
CTCTTCTAA
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| Protein sequence | MSTLTIEQVH SDYQGQTILR GLDLVLHQGE IAALLGPSGC GKTTLLKAIA GLQPISQGRI
SINGRLLSGP ETFVPSERRE VGMIFQDYAL FPHLTVAENI LFGVKGLDKA ARQARLGEML
ALVKLEGLGG RYPHELSGGQ QQRVSIARAL AYEPELLLLD EPFSNIDAKV RGEMMVEIRE
ILKQRGVSAV FVTHSKDEAF VFADKLALFK DGGIAQYGSA ESLYAEPTDK YVAEFLGQVN
YLSCEVKDRA RLQTLLGEVQ SSSDLPKAAG YRGELLLRPE QLQMAGDEQG EGTIIARRFL
GNLCHYSILI GEEILAVRSP LHHFSPGQKV GLSVTPHPAV LF
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