Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_0727 |
Symbol | |
ID | 4923290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | + |
Start bp | 827575 |
End bp | 828948 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640162260 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001092858 |
Protein GI | 127511661 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGC TGCGCACTAA GCTCATCTGG GGCAATGTGA TTGTTAGTCA GCTAGCCCTT GCCCTGTTTA TCCTGCTACT CAAGATGCTG GCGCCAGAGC TGTATCAGGA GGTGGCGCCT GAGCTGATAG TCGCCTGCCT GTTGCTGTCT GGCGGCTTTG CCTGGCTGCT CAGCCGCTGG CTGACCCGGG GGCTGTCGAC TAGCCTCAAG GCGCTGGAGG TGGGGCTGCT TAACATCAAA GACAATGATT TCAGCGTGAA CATTCCTGTG ACGGGGGACA GCCAGCTCAA GGCGCTGGCC AGCCTGTTTA ACGAGTCTGC GGCCGTGCTG CGCCGCGAGC GTCAGTATAT CTATCAGCGT GAGCTGCTGC TGGATAAGGT GATTCAAAGC TCGCCTAATG TCATGGTGCT GCTGGACGAT CGCCAGCGCA TCATCTACGC CAACGACGCC GCCCGCCACC TGTTTGCCCA GGGGGCGCGC ATTGAGGGCA GCATGTTAGA CGAGTTGCTG GACGGCGTCA GCGAGGAGCT GGCCGGCGCG GTCAACAATC CCAAGGGCGG GCTGTTTACC CTGGCGAGCG TGGAGGAGGG CGGCGAAGAT GAAACCTGGC ATCTCTCGCG GGGACGCTTC CTGCTCAACG GTCAGTATCA CCATCTCATT CTGCTCAAGC AGATGACCCG TGAGCTGAAC CGTCAGGAGG TGGCGGTATG GAAGAAGGTG ATCCGCATCA TCAGCCACGA GCTCAACAAT TCGGTGGCGC CCATCGCTTC TATGGTCAAT TCGGGCCGCA AGCTCACCGA GCCGCTGGAT GACCCTAAGC TTAAGCTTAT CTTCGACACC ATAGAGGACA GGACCAGCCA CCTGAGCCAG TTTATCTTCA ATTATGCCCG CTTCGCCAAG CTTCCCCTGC CCAAGAAGAG CGAGGTGGAT TGGCACAAGT TGGTCACTCA GCTGGCCGAG CATTTCCGTT TCAGTCTGGT GGGGGAGCTG CCTCGGCGCT GCGGCTATTT CGACCTGATT CAGCTGGAGC AGGTGCTGCT GAACCTACTC AAGAACGCCC ATGAGTCGGG CTCGCCCGAG GAGTCGGTAA GCCTAAGCGT CAGGGAGCAA GGCCTGGCGG ATGGCAGCGA CGGTGTGACT ATTGAGATAA CCGATGAGGG CAGCGGCATG TCGCCGGAGG TATTGACCCA GGCGCTGCTG CCTTTCTATT CCACCAAGCA GTCGGGTACC GGCCTGGGCC TGCCCTTGTG TAGGGAGATC ATCGAGGCCC ATGACGGCCG TATCAGTCTG CACAATCGCG AGCACAAGGG GCTGCTGGTG CGGATCTGGC TGCCCTATGA TCAGGCTCAG CAGCTCGGGC AGGCAAGCGC CTAG
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Protein sequence | MPTLRTKLIW GNVIVSQLAL ALFILLLKML APELYQEVAP ELIVACLLLS GGFAWLLSRW LTRGLSTSLK ALEVGLLNIK DNDFSVNIPV TGDSQLKALA SLFNESAAVL RRERQYIYQR ELLLDKVIQS SPNVMVLLDD RQRIIYANDA ARHLFAQGAR IEGSMLDELL DGVSEELAGA VNNPKGGLFT LASVEEGGED ETWHLSRGRF LLNGQYHHLI LLKQMTRELN RQEVAVWKKV IRIISHELNN SVAPIASMVN SGRKLTEPLD DPKLKLIFDT IEDRTSHLSQ FIFNYARFAK LPLPKKSEVD WHKLVTQLAE HFRFSLVGEL PRRCGYFDLI QLEQVLLNLL KNAHESGSPE ESVSLSVREQ GLADGSDGVT IEITDEGSGM SPEVLTQALL PFYSTKQSGT GLGLPLCREI IEAHDGRISL HNREHKGLLV RIWLPYDQAQ QLGQASA
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