| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0496 |
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| Symbol | |
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| ID | 4923644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 553040 |
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| End bp | 554413 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640162025 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_001092627 |
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| Protein GI | 127511430 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTC ACGCGTTACT AAGCGAGATC AACGCCATCG TCTGGGGCCC CATCACCCTG
TGCCTGCTGG TCGGTACCGG CCTCTATCTC ACCCTGCGCC TCAGGCTAAT CCAGGTCTTC
AAGCTGCCCC TGGCGCTTAG GCTGCTGTTT AAACCCGCCA GCGGCCAGGG GGATCTCTCC
TCCTTCGCCG CCCTGTGCAC CGCGCTGTCG GCCACCATAG GCACGGGCAA TATCGTCGGC
GTAGCCACCG CCATCAAGGT AGGCGGCCCG GGCGCCCTCT TCTGGATGTG GCTGGCGGCC
TTCTTCGGCA TGGCGACCAA GTATGGCGAG TGCATGCTGG CGCTCAAGTA TCGCACCACA
GATGCACGCG GCAATATCGC CGGCGGCCCC ATGTATTACA TAGAGCGCGG CCTGGGTCTG
GGCTGGCTGG CCAAGCTGTT CGCCCTGTTC GGCGTCGGCG TCGCCTTCTT CGGCATAGGC
ACTTTTGCCC AGGTCAACGC CATCAGCGAT GCCATGACCA TCGCCTTCCA CGTTCCCGCC
TGGGTCACGG CCCTAGTGCT CACCCTGCTG GTAGCCGCTG TTACCCTTGG GGGCGTTAAG
CGGATCGCCA AGGTGGCACA GAAGCTGGTG CCCAGCATGG CCCTGGGTTA CGTGCTGGCC
TGCCTGTGGA TTTTGGTGAC CTTTAGCGAG CAGATCATCC CGGCGCTGCA GCTGGTGATC
CACTCGGCCT TCAGCCCCAT CTCGGCCGCC GGCGGCTTCC TGGGTGCCAC GGTCGCCCAG
GCAATTCAGA TAGGGATCGC CCGTGGGGTC TTCTCCAACG AGTCTGGTCT GGGTAGCGCG
CCCATCGCAG CGGCAGCCGC CAAAACCAAG GAGCCGGTCG AACAGGGACT GGTGAGCATG
ACGGGCACCT TCTTCGATAC CCTGCTCATC TGCACCATAA CGGGACTGGT GCTGATCATC
ACAGGTGTCT GGAGCGGCGA CGCCGCAGGT GCCGCCATGA CCAGCGCCGC CTTCGCCACC
GGCGGTTCGG CCGTCATCGG CCAATATCTG GTGACCATAG CCCTGGTCTG CTTCGCCTTC
ACCACCATAC TGGGCTGGCA CTACTACGGC GAGCGCTGCT GGTACTATCT CACCGGCCAC
AAGCTGGGCG AGCGAGGGAT TAAGATCTAC CAGTTTATCT TCCTCAGCCT TATCGCCGTG
GGGGCCTTCA TCCAGCTGGA TCTCATCTGG CTGCTGGCCG ATACCGTCAA CGGCCTGATG
GCGATCCCCA ACCTGATCGC CCTCATCGGC CTGCGCAAGG TGATCATAGC CGACACCCTG
AGCTATTTCG CCGCCCGGGA TAGCCAGGGC GCGCAGCAGG AGCTGACCGC CTGA
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| Protein sequence | MNFHALLSEI NAIVWGPITL CLLVGTGLYL TLRLRLIQVF KLPLALRLLF KPASGQGDLS
SFAALCTALS ATIGTGNIVG VATAIKVGGP GALFWMWLAA FFGMATKYGE CMLALKYRTT
DARGNIAGGP MYYIERGLGL GWLAKLFALF GVGVAFFGIG TFAQVNAISD AMTIAFHVPA
WVTALVLTLL VAAVTLGGVK RIAKVAQKLV PSMALGYVLA CLWILVTFSE QIIPALQLVI
HSAFSPISAA GGFLGATVAQ AIQIGIARGV FSNESGLGSA PIAAAAAKTK EPVEQGLVSM
TGTFFDTLLI CTITGLVLII TGVWSGDAAG AAMTSAAFAT GGSAVIGQYL VTIALVCFAF
TTILGWHYYG ERCWYYLTGH KLGERGIKIY QFIFLSLIAV GAFIQLDLIW LLADTVNGLM
AIPNLIALIG LRKVIIADTL SYFAARDSQG AQQELTA
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