| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0280 |
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| Symbol | |
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| ID | 4920662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 297449 |
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| End bp | 298150 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640161804 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001092411 |
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| Protein GI | 127511214 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0095071 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAGC CCATGGCGTT AGATGCCTTA TCCACATTAG ACACAGAGAC GCCCGCACTC
ACCCTGGCGG ATAAGGCCTT ACAGGCGATC CAGACCAGTA TCATCAAGGG AGAGCTGGCC
CCCGGCAGCA AGATCAACGA GCAGATGCTT GCCCAACGCT ACGGCATCAG CCGCGGCCCT
ACCCGGGAAG CCCTGCTAAC CCTGGAGCGT CGCCGCCTCG TCGTCAGAAT TCCCCATGTC
GGTGCCCGCG TGGCACAGCT GTCGATAGAT GAACTCAACG ACCTCTACCG TCTGCGCAGC
GTGTTGGAAG GCATGGCCTG CGAGCTGGCC GCGAAACACA TTACGCCGAC GGCACTGATG
CAGCTGCAAC GCCTGATGGA TAGCCAGGAA GCGGCGCTGG CCAAGGGCGA CACCTATTTT
CAGCAAGATG GCGATGTGGA TTTTCACTAC CGCATCATAC GCGCCAGCGG CAGTCGCCAT
CTGCAGGAAA CGCTTATCGG TAACCTCTAC CACCTGCTGC GCATGTATCG TTATCAATGC
ACCAGCGAGA GCCGGCCGAC CAGGGCGATC GCCGAACACA GACGCATAGT CGAAGCCATT
GCCGCTGGCG ATGGCGAATT GGCCAGCCTA TTGATGCGCC GTCATATCGA ACAGGGGCGA
ATCAACACAG AGAAACGACT TAAGGCGCTA CAGGCAGAGT AG
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| Protein sequence | MSKPMALDAL STLDTETPAL TLADKALQAI QTSIIKGELA PGSKINEQML AQRYGISRGP
TREALLTLER RRLVVRIPHV GARVAQLSID ELNDLYRLRS VLEGMACELA AKHITPTALM
QLQRLMDSQE AALAKGDTYF QQDGDVDFHY RIIRASGSRH LQETLIGNLY HLLRMYRYQC
TSESRPTRAI AEHRRIVEAI AAGDGELASL LMRRHIEQGR INTEKRLKAL QAE
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