| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_4453 |
|---|
| Symbol | |
|---|
| ID | 5369278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009661 |
|---|
| Strand | + |
|---|
| Start bp | 74373 |
|---|
| End bp | 75074 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640819249 |
|---|
| Product | FRG domain-containing protein |
|---|
| Protein accession | YP_001355471 |
|---|
| Protein GI | 152998550 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.00112115 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACAT GTAGGGTCAG TAGCTTTCAA GAGCTACACG AAGCACTCAG TAAATACCGA
AAGGATAATC GGTGGATGTT TCGTGGACAT TCAAATTCTG AATGGCTACT TGTACCAACA
GCCGGTAGAG AACCGTTCTC AGATTCCGAC GACGAAAGAA TGTTTCGAGC TTGGCAGCGA
AGATCTGTAG AGTTCCTAAG TCCAAGACCA TCAAATGAAT GGGAATGGCT CTCTATTGCC
CAGCATCACG GTCTTGCGAC GCGTTTATTA GATTGGACAT ATCAGCCCTT GGTGGCGACT
TTTTTTGCCG TAAGCACTTA TCATGAAGGC GATGCTCATC TTTACTGCTT AAGAGCAGAT
AAAATCTATG AACAAACAGA TGCATCACCG TTCAAAGCAA AAACTTTGGC AAAGTATAAG
CCACACACTG TGGCCTCTCG CATTGTTAGG CAAGGCGGTC TTTTTACAAT TCACCCTGAG
CCATCTATTC CGTTAACAGA AGCAAAAAGC ACAAAAGATA CACTTGAACT TATTGTTATT
GAGGCTAAAT TTCGCGAGCA ATTGCCTTTT GAGCTATCTC ACTATGGAAT TAATCACTCA
TCTATATTTC CAGATCTCGA TGGTCTTTCA GAACATATAA ATTGGTATAG TGCGAATAAA
GACTACTGGG TTACACCTGA GGACTCTAGC GATGGTATTT AA
|
|---|
| Protein sequence | MDTCRVSSFQ ELHEALSKYR KDNRWMFRGH SNSEWLLVPT AGREPFSDSD DERMFRAWQR
RSVEFLSPRP SNEWEWLSIA QHHGLATRLL DWTYQPLVAT FFAVSTYHEG DAHLYCLRAD
KIYEQTDASP FKAKTLAKYK PHTVASRIVR QGGLFTIHPE PSIPLTEAKS TKDTLELIVI
EAKFREQLPF ELSHYGINHS SIFPDLDGLS EHINWYSANK DYWVTPEDSS DGI
|
|---|
| |