| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3481 |
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| Symbol | |
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| ID | 5371947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 4135542 |
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| End bp | 4137008 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640831741 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_001367671 |
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| Protein GI | 153001990 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAATG ATGGCTACAC TTCCCTAAGC AATTTTATCG ACCTTCTCTT GGATGCTATT
TGCGTCGTCG ATAAAGCGGG GCGGTTTGAA TTTGTTAGTG CCGGGGCAGA ACGCATTTTT
GGCTATACCC CAGAAGAAAT GATTGGCATG CAGATGCTCG ATCTTGTTAT TCCTGAGGAT
AGAGAGCGCA CACTCGCAAC CGCTAATGAG ATTATGACTG GCCGCTATAA GGTCGATTTC
GAAAACCGTT ATGTGCGTAA AGACGGCGTA ATTGTCGATA TTTTGTGGTC CGCACGCTGG
TCCGATGCTT ACCAACAACG CGTCGCGGTC GCCAGAGATA TCTCTAAGAG TAAAAACGCC
GAACGCAGAC AAGCTGCACT GTATGAGATT TCTGAAGCTG TGCATGTCGC TGAGGACTTG
CTAGCCCTAT ATCGCCGCAT CCATGAAATC ATTGCAAAAT TGCTGCCCGC GGCAAACTTT
GCCATCGCAT TGTACGATCA AGATTTAAAT GAACTCAGTT TCCCTTACAA AGCCGCTGCG
GGTGATAATT CACTGGTCGA TATTGCAAGT TTCAGCCTGT TCACCGAACA AGTGATCCAC
AGTGCAGAGT CTTTACTCCT GTGTCCCGTG ACCTTATCTG AGTATCCCCA AGCCATTCGT
GAAGAGCTGG GTAATGGCAA TTTAAGTTGG TTGGGTGTGC CGCTAAAGCT GCAAAAAGGC
GTTATCGGTG CCTTGATGAT GCATAGCTTG CCCACTTCGG CTTCTTATAC GCACCAAGAC
CGTGAGCTAT TGGAGTTTGT TTCTACGCAA ATTGCCTTTG CGATTGAACG CCGACAAATG
CTTGCGCGAT TAGAGCATAT TGCGCTGTAT GATCAGCTAA CCCTGTTGCC CAATCGTGAG
CTTTTTTACG ACAGGTTTCA AAAGGCGCTA TCCAGAGCCC ATAGGGAATC AAGTTATTTC
TCTTTACTTT ATTTAGACTT AGATAAGTTT AAGTGGGTGA ACGATAACTT TGGTCATAGT
GTTGGCGATT TATTGCTGCA AGTGACAGCA CAACGTATTG TCAGTTGTGT AAGGGGCTCT
GATACCGTAG CGCGTTTCGG GGGCGACGAG TTTGTCATCT TACTTGAGCG CGTTGATTCG
GCACAAAATA CCCTGTTGGC TGCGCAAAAA ATATTACAAG TGCTCAATCA ACCCTTTGAG
CTTACCGATC AGCAAATCCA TATTTTACCG AGTATCGGTA TTGCCCTGTA TCCAGAGCAC
GGCACGGACG AAAAACAGTT ACTTTCCTGT GCGGATGCGG CCATGTATAA GGCTAAGAAA
AATGGGGGCA ATCGCATTGA AATGGGCTAT CAAGGGCTGA GAAACCTGCA TGCAGATCCT
TCCACAGCAG CTCCTGAGTT AAAGAGTGCT GAGTTAAAAG ACACTGAGTT AAATAACCTT
GAAAACAAGG TGACTAAGAT AGTGTGA
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| Protein sequence | MNNDGYTSLS NFIDLLLDAI CVVDKAGRFE FVSAGAERIF GYTPEEMIGM QMLDLVIPED
RERTLATANE IMTGRYKVDF ENRYVRKDGV IVDILWSARW SDAYQQRVAV ARDISKSKNA
ERRQAALYEI SEAVHVAEDL LALYRRIHEI IAKLLPAANF AIALYDQDLN ELSFPYKAAA
GDNSLVDIAS FSLFTEQVIH SAESLLLCPV TLSEYPQAIR EELGNGNLSW LGVPLKLQKG
VIGALMMHSL PTSASYTHQD RELLEFVSTQ IAFAIERRQM LARLEHIALY DQLTLLPNRE
LFYDRFQKAL SRAHRESSYF SLLYLDLDKF KWVNDNFGHS VGDLLLQVTA QRIVSCVRGS
DTVARFGGDE FVILLERVDS AQNTLLAAQK ILQVLNQPFE LTDQQIHILP SIGIALYPEH
GTDEKQLLSC ADAAMYKAKK NGGNRIEMGY QGLRNLHADP STAAPELKSA ELKDTELNNL
ENKVTKIV
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