| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1983 |
|---|
| Symbol | |
|---|
| ID | 5373709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2362631 |
|---|
| End bp | 2363893 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640830187 |
|---|
| Product | HipA domain-containing protein |
|---|
| Protein accession | YP_001366189 |
|---|
| Protein GI | 153000508 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.435879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGACTT CTAGTAACCA ATGCTTCGTT TGGAAATGGC TTAGAGGACA TTCAGAACCT
GTGGTAGCCG GTAGACTCAC TATTGATGAA TCTGGCCAAC ATTTTACCTA TGGTCAGTCT
TACTTGAAGC GTCCAGATGC AGAGCCAATT TACTCACATG AATTACCGCT TTCTGCTGGT
ACTATGCAGC CAGTTCAAGG TATGTCTATA TTCTCATGCT TGCGTGATGC AGCTCCTGAT
GCTTGGGGAC GTAGGGCCAT TATTTCTCGG CTGATGAGCA AAAGCTACGA TGCTGAGTTT
AACGAAATGA CGTATTTGAT GCATTCCGCT TCAGACCGGT TCGGTTCTCT CGACTTTCAA
GAATCGGCCA CTGAGTATGT TGATCGTTCT ACTGATGCAG CCACGCTTGA AGAGTTATAC
CTGGTGTCTG AAATCGTCGC TCAAGGTAAG AAAATCCCGT TGGATTTGGA TAAAGCACTT
ATGCATTGTA CATCGCTGGG AGGTGCTCGT CCGAAAGCGA TGATCACTGG TGGTGAAGCT
AAGTATATTG CTAAATTTTC ATCCCAAAAT GATACTTACG AGGTTGTCTA TTCAGAATAC
GTAGCCATGA AGTTAGCTAA GTTAGCCGGA CTCAATGTGG CCGAAGTTGT ATTAAAAAAA
GCATTAGGCA AAGATGTTCT TCTTGTTAAA CGATTCGATA GAGAGTTGAT TGGTGGTATT
TGGTGTCGTC GCTCTATGGT GTCCGGACTG ACAGTTTTAG GCTTAGATGA AGCATGGGCT
AGCGAGGCTT CTTATGTAGA CCTAGTAAAC GTTATGAAGC AGTATTGCAT CGCATTTGCC
TCTGATAGCC AAGAGCTATT TGCACGGATG GTATTTAACG TGCTGATCGG CAATACGGAT
GACCATGCTC GCAATCACGC TTTCTTTGTC GAAGGGGATA AAATATCTCT ATCACCTGCT
TATGATATTT GTCCACAAAA CCGTAGCGGT GGGGAGGCAA ATCATGGAAT GAAGCTCTTC
GACAATTCAA ATTTGTCTCT GTTATCACTT TGTCTGAAAG CAGCACCAAG CTTCAATATT
AAGGCCGAAA AAGCAGAAGA AATTATCAGA TCGCAGATTA ATACGATTAT CCAAGAGTTT
GAATCCGTGT GTAACGAAGT AGATGTCTCT GAAGTAATGC GAAAGTTACT TTTCAAACGT
GTGATATTGA ATGACTACAT ATTCAATGAA ATGGAACACC TAAAGCCGCA AGATGATCGC
TAA
|
|---|
| Protein sequence | MTTSSNQCFV WKWLRGHSEP VVAGRLTIDE SGQHFTYGQS YLKRPDAEPI YSHELPLSAG
TMQPVQGMSI FSCLRDAAPD AWGRRAIISR LMSKSYDAEF NEMTYLMHSA SDRFGSLDFQ
ESATEYVDRS TDAATLEELY LVSEIVAQGK KIPLDLDKAL MHCTSLGGAR PKAMITGGEA
KYIAKFSSQN DTYEVVYSEY VAMKLAKLAG LNVAEVVLKK ALGKDVLLVK RFDRELIGGI
WCRRSMVSGL TVLGLDEAWA SEASYVDLVN VMKQYCIAFA SDSQELFARM VFNVLIGNTD
DHARNHAFFV EGDKISLSPA YDICPQNRSG GEANHGMKLF DNSNLSLLSL CLKAAPSFNI
KAEKAEEIIR SQINTIIQEF ESVCNEVDVS EVMRKLLFKR VILNDYIFNE MEHLKPQDDR
|
|---|
| |