Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1398 |
Symbol | |
ID | 5369488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1681234 |
End bp | 1682532 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829597 |
Product | major facilitator transporter |
Protein accession | YP_001365611 |
Protein GI | 152999930 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA AACTCATCAT TCTGTTTGTC CTCTGTACTT TCTTTGTTAT TTCCTTGATG ACCAACAGTA TGGGGCCGAT TTTCCCTGCG TTAATTGACA GTTATGCTAT CGGCCTGACG TTGGCGGGGT TATTTCCCTT TGCGTTTTTT ATCGCCTACG GGGTGACATC GATTCCTGCG GGGATTTTGG TGGACAAGTA CGGTGAAAAG CGAGTGATCA TCTTAGCCTT TAGCCTAGCG TTTATCGGCG CTGTGACTTT TGTGTGTCTC CCTTCCTTTA GCATCGCCAT GTTTAGCCTG TTTTGTATCG GCACTGGCAT GAGCTTATTG CAGGTAGCAG TGAATCCCTT ACTGCGCCAA GCCGCGGGGC CAGAGCATTT TGCCTTTTTC TCCGTACTGG CCCAACTTGC CTTTGGCGGC GCAGCGACCT TAGCGCCGCT GGTGTACCAG CATTTTGTCG CCTTAGATCA AGCCAGTGTT ACATCAGCCA ACTATGTGCA ACAGCTATTG CCCGAGAACA TGAGTTGGCT CGCCATGTAC TGGTTATTTG CCGTGGTCGC ACTCGCCATG GTGTTCTTTG CCAGCTTAGT GAAGATGCCC AAAGTGGATA AATTGGCCGA TGAGTCGGCG GGTGCACTGG AGACCCATTT ACGCCTTTTC AAAGATAAAA CCGTTTTGAA ATTCTTCTTC GCTATCGCCG CCTACGTTGC ACTTGAGCAA GGGCTTGCTA ACAGTATCTC AGTCTTTTTG CTGCAATATC ATGGTCTTGA CACCTTAAGT GTCGGCGCCA ATGTGGTTAG CGATTTTTGG TTTTACATGA CGCTCGGCTG CCTACTCGGT TTGCTGCTAC TTAAACTTAT CGACAGTCAG ATCTTGCTGC TCAGTTTTTC CCTTAGTTCA CTGGTTTGTT TTCTGGTGGC GATTTGGGGA CCGAGCCAAC TAACATTAAT TTGTTTCCCA TTGGTTGGCT TTTTCATTTC TATCATGTGG TCGGTGATCT TCTCGCTGGC GCTTAATTCG CGCACTCAAG ATCACGGATC ATTCGCTGGC ATTCTCTGTA CTGGCATTAT CGGCGGCGCG TTTATCTCGC CGATCATTGG TGTTATCAGT GAGCAGTCCG GCGAGTTACG GTTCGGGATG TTAGTGCTGT TAATCCCTAT GGCTTACATA GGTTATGTCG CGCTAACGGC TCGCCCCTTG ATTAAAAACA CCACCCTATT TTCAACAAAA GCGGCATCAA AGAATGACGG TTCTAAGCAG ATGGCGACAA CCAACACGAG AGGCAACAAG CTATTATGA
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Protein sequence | MKHKLIILFV LCTFFVISLM TNSMGPIFPA LIDSYAIGLT LAGLFPFAFF IAYGVTSIPA GILVDKYGEK RVIILAFSLA FIGAVTFVCL PSFSIAMFSL FCIGTGMSLL QVAVNPLLRQ AAGPEHFAFF SVLAQLAFGG AATLAPLVYQ HFVALDQASV TSANYVQQLL PENMSWLAMY WLFAVVALAM VFFASLVKMP KVDKLADESA GALETHLRLF KDKTVLKFFF AIAAYVALEQ GLANSISVFL LQYHGLDTLS VGANVVSDFW FYMTLGCLLG LLLLKLIDSQ ILLLSFSLSS LVCFLVAIWG PSQLTLICFP LVGFFISIMW SVIFSLALNS RTQDHGSFAG ILCTGIIGGA FISPIIGVIS EQSGELRFGM LVLLIPMAYI GYVALTARPL IKNTTLFSTK AASKNDGSKQ MATTNTRGNK LL
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