Gene Shew185_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1388 
Symbol 
ID5371593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1672602 
End bp1673213 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content44% 
IMG OID640829587 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001365601 
Protein GI152999920 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC CTGATGACGT AAAAAAGACT GCTGTATTGC AGGTGCCAAC TTGCCAACCA 
CTGCAACAAT ATTTGATTGC ATTAGGGGCG AGTCAAGCTG CTGTTGAACG TTACTTACCA
CAGTTTAAAG CGTTGAACGT GCCGGCGGGA GAGGTGCTTC TTGGCCAAGG AAATGAGCAG
TCACAGGCAT ATTTTGTTGT AGATGGTATA GTGCGCGCTT GCCATTATAC GCAGGAGGGC
ATAGAGCGCT GTAAGGAGTT TTATTTCGAG GGTGAACTGT GTTTTTTGTA TGTCAGTTGG
CTTAAGCAAA TTCCCGCTCG TTACCAATTA GAAGCTTTAA GCGCCTGTAA ACTTATCCAA
ATGCCCTTAT CCGTGTTGGA TGATACTTTG CTGCAGGCCG TGCAACTTGG GTTACTTAAA
CAGCAATTAT TGTATAAAGA ACAAAAGGAA GCCTTTTTAC TGCTGCACAC ACCTGAGCAA
CGTTATCTGT ATTTACGCGA ACATTCACCA CTTTGGCTTG AGCGGTTAAG CCAAGGTCAG
TTAGCTAATT ATATTGGCAT TACGGCAATC AGTTTGTCGC GTATGCGTCG ACGACTTCAA
GACTCTTTTT AA
 
Protein sequence
MIEPDDVKKT AVLQVPTCQP LQQYLIALGA SQAAVERYLP QFKALNVPAG EVLLGQGNEQ 
SQAYFVVDGI VRACHYTQEG IERCKEFYFE GELCFLYVSW LKQIPARYQL EALSACKLIQ
MPLSVLDDTL LQAVQLGLLK QQLLYKEQKE AFLLLHTPEQ RYLYLREHSP LWLERLSQGQ
LANYIGITAI SLSRMRRRLQ DSF