| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_27620 |
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| Symbol | |
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| ID | 8396650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 3060490 |
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| End bp | 3061263 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644987504 |
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| Product | spermidine synthase |
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| Protein accession | YP_003145108 |
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| Protein GI | 257065436 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.090706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT CGCTCGTCTG CGGAAACGAA GCAGGCCCGC TGCTGGAAAA ATACACGTAC
CCCACCATGT TCGGCGATGC GGACGTATTC ACGATGGAAA CCGACGACGG CGTGCCTGTA
CGGGCGCTGT ATGTGGGAGG CGGGTTCCAG TCGGCCACGT ATCTGGGCGG GCGGCGCTTC
GAGCCCGTGT TCGCCTATTG CCGAGCCATC GACCGCGCGT TCGACGTGCG CCCCGTGCGG
CGCATGCTCA TGATCGGCGG CGGGGCATTC TCCTACCCAA AACACCTTTT GACCAGCGAC
GATGTGCGCC TGCAGAAGGC TTCCATAGAC GTGGTGGAAA TCGATCCGGC CATTGTGGAC
ATCGCGCGGC GTCATTTCTT TCTTGACGAG GTCGAACGTT TGCACGGACC GGCCGGAACG
GGGCGTTTGG GCATCATCGT CGGCGACGGG GTAGAGGCAG TGCGGGCTGC GGCGCCTTCG
ACCTATGACG TGGTGGTGAA CGATTCCTTC GACGGCACCA ACCCCACCAG CGGCCTGCTT
GCTCCGGAAA CCCTGCAGGC CACGAAATAC GCCATGACCG ATGGCGGGTT GTACCTGGTT
AACGCCGTGT CAGAAACCAT CGGCGACATC GAGGCCTTCG TATGGACGCT GCACGAGGTG
TTCGTCCACG TGCACCTGTT GCGCTGCCCC GACGAGGATT TCGACGGGTC CGAAAACAAC
CTGATCATCG CGTCGGATGC GTCGGTCGAC CTGCCGGGGC TACTGGTGCT GTAG
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| Protein sequence | MPDSLVCGNE AGPLLEKYTY PTMFGDADVF TMETDDGVPV RALYVGGGFQ SATYLGGRRF
EPVFAYCRAI DRAFDVRPVR RMLMIGGGAF SYPKHLLTSD DVRLQKASID VVEIDPAIVD
IARRHFFLDE VERLHGPAGT GRLGIIVGDG VEAVRAAAPS TYDVVVNDSF DGTNPTSGLL
APETLQATKY AMTDGGLYLV NAVSETIGDI EAFVWTLHEV FVHVHLLRCP DEDFDGSENN
LIIASDASVD LPGLLVL
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