Gene Shel_27130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_27130 
Symbol 
ID8396601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2998905 
End bp2999429 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content60% 
IMG OID644987455 
Producthypothetical protein 
Protein accessionYP_003145060 
Protein GI257065388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.823012 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTGCC CGCAATGCGG AACCGAAAAC CCCGATGGAA CCGCCTTCTG CGCCAACTGC 
GGAACGACCC TCGGTGCAGC CGCTGCGCCT ACGAGCGCCC CAACCCCCGA GCCGGTTGCG
GCACCCGTGA ACGCTGCGTA CGACCCTCAG CAGCAGCAGC AATATCAGCA GCAATATCAG
CAGCAGCAGT ACCAGCAGTA TCAGCCGGCC AACGTCTACA CCGGCCCCAT CGAGGGTGAC
GCCAACAAGC GCGCCTTCGC CGCCAGCCTC TATTGGAACA GTCTCATCGG CGTCATCATC
GCTGTCGTTA CCGGCAACAT GACCGACCCC TTCATCAAAT TCCATGTGAA CCAGATCGTC
GTCCTGCTGA TTTCCTACGT CGTCTGCGGC ATCCTGTCCA TCATCCTCAT CGGCTTGATC
GCGATGATCT TCGTGTTCGT CTGCCAGATC CTGGGCACCG TCGCTGCGTA TCACGGCGAG
ATGAAGGAGA TGCCGCTCCT CGGCAAGCTC CACATCATCA AGTAG
 
Protein sequence
MFCPQCGTEN PDGTAFCANC GTTLGAAAAP TSAPTPEPVA APVNAAYDPQ QQQQYQQQYQ 
QQQYQQYQPA NVYTGPIEGD ANKRAFAASL YWNSLIGVII AVVTGNMTDP FIKFHVNQIV
VLLISYVVCG ILSIILIGLI AMIFVFVCQI LGTVAAYHGE MKEMPLLGKL HIIK