Gene Shel_20960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20960 
Symbol 
ID8395985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2326786 
End bp2327595 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content60% 
IMG OID644986845 
Productpredicted hydrolase or acyltransferase of alpha/beta superfamily 
Protein accessionYP_003144456 
Protein GI257064784 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACC TTGAAGGCGG GCGCATGCCC GTCGGCGGTT CAGACATGGA TTACATCGGA 
TTCGGGTCGG GCAGCGAAGC CCTTATCCTG ATTCCGGGGT TGGGAGATGG GCTGAAAACC
GTCAGGGGCA TGGCCGCGCC CTTTTCCCTC ATGTACCGCA AGATTGCGAA GCGGTTCCGT
GTGTACTCTT TCAGCAGGCG AAACGTGCTG CCCGATGCTT TCTCCACCAG GGATATGGCC
GATGACGTCG TGACGTGCAT GGATCGGCTC GGACTGCAGC GGGCTTGCGT GGTTGGCGTG
TCGTTGGGCG GCATGATCGC CCAGGAGATT GCCATCCGCC ATCCCGAAAG GGTGGACAAA
CTGGTGCTTG TGGTGACGGC CGCCCGCCGA AACGCCACGA TTGAGCGGCG CATCGAGCAC
TGGAAGGAGC TTGCTCTTCG GGGCGACCGG CGCGAGCTTA TGCTCGATAC GGCCAGATAC
ATGTACACGC CGGAATACTT CGCGAAGTCG AAAGCCATGT ACGGGCTGGT CGGAGCGGTA
ACCAAGCCGA AAAGCTATAG CCGCTTCCTC GTGCAGGCGG ATGCATGCCT GACCCATGAC
GCCTACGACG AGTTGGCAGG CATCACGGCG CCCACGTTGG TCATCGGCGG CGCGAAGGAT
GAAACGGTCA CGGGCGAGGC GTCGTTGGAG CTGGTGTCCC GCATTCCGAA CGCGCTTCTA
CATATATATG ATGAATACGG CCACGGTGCC TACGAAGAGG CCAGCGATTT CCAGGACCGG
CTGCTGGCGT TTCTCCAAGG GGAACTCTAG
 
Protein sequence
MFNLEGGRMP VGGSDMDYIG FGSGSEALIL IPGLGDGLKT VRGMAAPFSL MYRKIAKRFR 
VYSFSRRNVL PDAFSTRDMA DDVVTCMDRL GLQRACVVGV SLGGMIAQEI AIRHPERVDK
LVLVVTAARR NATIERRIEH WKELALRGDR RELMLDTARY MYTPEYFAKS KAMYGLVGAV
TKPKSYSRFL VQADACLTHD AYDELAGITA PTLVIGGAKD ETVTGEASLE LVSRIPNALL
HIYDEYGHGA YEEASDFQDR LLAFLQGEL