Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17550 |
Symbol | |
ID | 8395645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1984204 |
End bp | 1984806 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644986509 |
Product | putative transcriptional regulator with cupin domain |
Protein accession | YP_003144123 |
Protein GI | 257064451 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0466174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATCA CCAACATCAA GCAAGCCGCA GATCGCATCC GTGCGCTCCG CGAGGATCTT GGTCTGTCCA TGCAGGAAAT GGCAACTGCC ACGGGCCGCA CCCTTGCCGA ATACGCGGCG CAGGAATCGG GAGAAACGGA TCTTTCCTTC ACGTTCCTGC ACAAATGCGC AAAGGAACTG GGCGTTGACG TCGTCGAGTT GCTGACGGGC GAAACGCCGC ACCTGACCGG ATGCTCCCTC GTTCGCAAGA GCGAAGGCCT TTCCATCCAG CGCAAGGGTA GCTTCGAATA CCTGCATAAG GCACCGAACC TCAGGCACCG CCTGGCTGAA CCGTTCCTGG TTACCCAACC CTACGAGGAG GAAGAGCAGG GCAAGCCCAT CCACCTCTCC TATCATGAGG GCCAGGAGCT CGACTACATC ATCTCCGGCC GCATGCGCTT CGCATACGAA GACGGCGGCG ATGTCGCCAT CGAAGAACTC GGTCCCGGCG ACCTTCTCAT GTACGACTCC GGCAAAGGCC ACGGCATGAT TGCCATCGAA GGCGAGCCAG TCGTATTCCT CGCTATCGTA ATGAAGCCCG AAGGGAACGC AGGCATTATC TAG
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Protein sequence | MEITNIKQAA DRIRALREDL GLSMQEMATA TGRTLAEYAA QESGETDLSF TFLHKCAKEL GVDVVELLTG ETPHLTGCSL VRKSEGLSIQ RKGSFEYLHK APNLRHRLAE PFLVTQPYEE EEQGKPIHLS YHEGQELDYI ISGRMRFAYE DGGDVAIEEL GPGDLLMYDS GKGHGMIAIE GEPVVFLAIV MKPEGNAGII
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