Gene Shel_16100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16100 
Symbol 
ID8395500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1809405 
End bp1811015 
Gene Length1611 bp 
Protein Length536 aa 
Translation table11 
GC content63% 
IMG OID644986364 
Producthypothetical protein 
Protein accessionYP_003143978 
Protein GI257064306 
COG category[S] Function unknown 
COG ID[COG3864] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000262808 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGCCTGA TGATGGCATT TCGGTTTTTA GACCGGGCAC TGTGGCAGAT GCCTTTGGCG 
GCCGGCGACG TAGAAGGGCT GCTGGCGACC GACGGCTTGG AGCTGCGTTT CGATGCGCAC
GGCGTCATGA AGGCCTATCG CAAGAACCCC GATGCGGTGG TCAGGGCGTT TCTCCACAGC
GTGCTGCACT GCATCTTCCG CCATCCGCTG CGCACGGTGC GCAAGGATCC GGCTGTATGG
AACCTGGCCT GCGACATATG CGTCGAAGCG GTAGCGCTGC AGCTGTGCGG CCTACGGTTC
GAAACGCCCG AGGACAAAGC AATCCGCAAG GTCGTCGACC GGTTGGAAGA CGAGGGTTGC
GCGCTGGTGC CGTCGCAGGT TTACCGCAGG CTGCTGATGG CGCGCACGAA TCCCGATGCG
CATCGGTGGC TTCAGCCCTA CGCCGAAGAC CCCGAGACCT TCGGCGCGCC GTTCGCGCGG
GACAGCCACG AGCTGTGGGA CATTGCTGCG CCAAAGGTTC AAGAGGATTC CGACGAGGAC
ATCCAGACGC AGCCTGGCCC GCACGACCAA GGAGCCAGTC AGGGCGAAAG CCAGGCGCCC
GGCGTCGACA GCGCCGACGG CGAGGATTCG GACGTCGGCG ATTCTGAGGA CGGGGGCGAA
GGCGACGCGA AAGACGACCT TTCCGGCGAA GGCGCCGACG ACGGACGCGC CGGACAGGGC
GGCACGGACG GCTCCCCTCA GCTCGAGATG GGAGAGGAAA CGGCTGGTTC CGAAGACGGG
CAGGCCCGTG AGGCGTCAGT CCCGGACGCA TCGGTGCAGG ACCGGGAGGA GACCGGCGCC
GAGCAGGCCT GGCAAGACAT TGCCCAACAG GTCCAAACCG AGATGCAGTC GTTTTTGCAG
GCCCAAGGCA CGCAAACCGG CCGCATGGAC GAGAACCTCA CGTTGGCGAA CCGCAAACCT
GTGGATTACG AAGACTTCCT TAGGAGGTTC TGCGCCCTGA ACGAGCGGAT CAAGACCAAC
GATGAGGAAT TCGACTACGT GTTCTACACC TACGGGCTGC AGCGTTACGG CAACATGCCC
CTCATCGAGC CTTTGGAGTA CCAGGAGTCC TTCGGCCTGC GCGAATTCGT GATCGCCATC
GACACCAGCG GGTCCTGTTC TGGCGAGCTG GTGCGGCAGT TCCTTACGCG CACCTGCGAC
ATCCTGGGCC AGGCGCACCT GTCGGGCACG CGGGTGAACA TCCATGTGGT GCAATGCGAC
GCGGCGGTAC AAAGCGACAC CGTCATCACC CAGGAGAGCG ACCTTCGCGA CCTTGTGGAC
AATCTGACGG TCCGAGGCTT CGGCGGCACC GATTTCCGCC CTGTGTTCGC CTATGTTGAC
GAACTGGTGC AGCGTGGCGA ATTCTCCGAC CTGCGCGGAC TTGTCTATTT CACTGACGGG
TTCGGGGCGT TCCCGAAGAA TCCGCCAGGA TACGACGTAG CCTTCGTGTT CGTAGAGGAG
GAAGGCAGGC AGTGGCGCGT GCCGCCATGG GCCTGCAAAG CGGTCATCGG TGAGGATGAC
ATATTGCAGA TAGACGCGCA GGGCAAGGCC CTCGAGGGGA ACAGGAGTTG A
 
Protein sequence
MRLMMAFRFL DRALWQMPLA AGDVEGLLAT DGLELRFDAH GVMKAYRKNP DAVVRAFLHS 
VLHCIFRHPL RTVRKDPAVW NLACDICVEA VALQLCGLRF ETPEDKAIRK VVDRLEDEGC
ALVPSQVYRR LLMARTNPDA HRWLQPYAED PETFGAPFAR DSHELWDIAA PKVQEDSDED
IQTQPGPHDQ GASQGESQAP GVDSADGEDS DVGDSEDGGE GDAKDDLSGE GADDGRAGQG
GTDGSPQLEM GEETAGSEDG QAREASVPDA SVQDREETGA EQAWQDIAQQ VQTEMQSFLQ
AQGTQTGRMD ENLTLANRKP VDYEDFLRRF CALNERIKTN DEEFDYVFYT YGLQRYGNMP
LIEPLEYQES FGLREFVIAI DTSGSCSGEL VRQFLTRTCD ILGQAHLSGT RVNIHVVQCD
AAVQSDTVIT QESDLRDLVD NLTVRGFGGT DFRPVFAYVD ELVQRGEFSD LRGLVYFTDG
FGAFPKNPPG YDVAFVFVEE EGRQWRVPPW ACKAVIGEDD ILQIDAQGKA LEGNRS