Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16100 |
Symbol | |
ID | 8395500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1809405 |
End bp | 1811015 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986364 |
Product | hypothetical protein |
Protein accession | YP_003143978 |
Protein GI | 257064306 |
COG category | [S] Function unknown |
COG ID | [COG3864] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000262808 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGCCTGA TGATGGCATT TCGGTTTTTA GACCGGGCAC TGTGGCAGAT GCCTTTGGCG GCCGGCGACG TAGAAGGGCT GCTGGCGACC GACGGCTTGG AGCTGCGTTT CGATGCGCAC GGCGTCATGA AGGCCTATCG CAAGAACCCC GATGCGGTGG TCAGGGCGTT TCTCCACAGC GTGCTGCACT GCATCTTCCG CCATCCGCTG CGCACGGTGC GCAAGGATCC GGCTGTATGG AACCTGGCCT GCGACATATG CGTCGAAGCG GTAGCGCTGC AGCTGTGCGG CCTACGGTTC GAAACGCCCG AGGACAAAGC AATCCGCAAG GTCGTCGACC GGTTGGAAGA CGAGGGTTGC GCGCTGGTGC CGTCGCAGGT TTACCGCAGG CTGCTGATGG CGCGCACGAA TCCCGATGCG CATCGGTGGC TTCAGCCCTA CGCCGAAGAC CCCGAGACCT TCGGCGCGCC GTTCGCGCGG GACAGCCACG AGCTGTGGGA CATTGCTGCG CCAAAGGTTC AAGAGGATTC CGACGAGGAC ATCCAGACGC AGCCTGGCCC GCACGACCAA GGAGCCAGTC AGGGCGAAAG CCAGGCGCCC GGCGTCGACA GCGCCGACGG CGAGGATTCG GACGTCGGCG ATTCTGAGGA CGGGGGCGAA GGCGACGCGA AAGACGACCT TTCCGGCGAA GGCGCCGACG ACGGACGCGC CGGACAGGGC GGCACGGACG GCTCCCCTCA GCTCGAGATG GGAGAGGAAA CGGCTGGTTC CGAAGACGGG CAGGCCCGTG AGGCGTCAGT CCCGGACGCA TCGGTGCAGG ACCGGGAGGA GACCGGCGCC GAGCAGGCCT GGCAAGACAT TGCCCAACAG GTCCAAACCG AGATGCAGTC GTTTTTGCAG GCCCAAGGCA CGCAAACCGG CCGCATGGAC GAGAACCTCA CGTTGGCGAA CCGCAAACCT GTGGATTACG AAGACTTCCT TAGGAGGTTC TGCGCCCTGA ACGAGCGGAT CAAGACCAAC GATGAGGAAT TCGACTACGT GTTCTACACC TACGGGCTGC AGCGTTACGG CAACATGCCC CTCATCGAGC CTTTGGAGTA CCAGGAGTCC TTCGGCCTGC GCGAATTCGT GATCGCCATC GACACCAGCG GGTCCTGTTC TGGCGAGCTG GTGCGGCAGT TCCTTACGCG CACCTGCGAC ATCCTGGGCC AGGCGCACCT GTCGGGCACG CGGGTGAACA TCCATGTGGT GCAATGCGAC GCGGCGGTAC AAAGCGACAC CGTCATCACC CAGGAGAGCG ACCTTCGCGA CCTTGTGGAC AATCTGACGG TCCGAGGCTT CGGCGGCACC GATTTCCGCC CTGTGTTCGC CTATGTTGAC GAACTGGTGC AGCGTGGCGA ATTCTCCGAC CTGCGCGGAC TTGTCTATTT CACTGACGGG TTCGGGGCGT TCCCGAAGAA TCCGCCAGGA TACGACGTAG CCTTCGTGTT CGTAGAGGAG GAAGGCAGGC AGTGGCGCGT GCCGCCATGG GCCTGCAAAG CGGTCATCGG TGAGGATGAC ATATTGCAGA TAGACGCGCA GGGCAAGGCC CTCGAGGGGA ACAGGAGTTG A
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Protein sequence | MRLMMAFRFL DRALWQMPLA AGDVEGLLAT DGLELRFDAH GVMKAYRKNP DAVVRAFLHS VLHCIFRHPL RTVRKDPAVW NLACDICVEA VALQLCGLRF ETPEDKAIRK VVDRLEDEGC ALVPSQVYRR LLMARTNPDA HRWLQPYAED PETFGAPFAR DSHELWDIAA PKVQEDSDED IQTQPGPHDQ GASQGESQAP GVDSADGEDS DVGDSEDGGE GDAKDDLSGE GADDGRAGQG GTDGSPQLEM GEETAGSEDG QAREASVPDA SVQDREETGA EQAWQDIAQQ VQTEMQSFLQ AQGTQTGRMD ENLTLANRKP VDYEDFLRRF CALNERIKTN DEEFDYVFYT YGLQRYGNMP LIEPLEYQES FGLREFVIAI DTSGSCSGEL VRQFLTRTCD ILGQAHLSGT RVNIHVVQCD AAVQSDTVIT QESDLRDLVD NLTVRGFGGT DFRPVFAYVD ELVQRGEFSD LRGLVYFTDG FGAFPKNPPG YDVAFVFVEE EGRQWRVPPW ACKAVIGEDD ILQIDAQGKA LEGNRS
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