| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13390 |
|---|
| Symbol | |
|---|
| ID | 8395230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 1533653 |
|---|
| End bp | 1534555 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644986094 |
|---|
| Product | NADH:ubiquinone oxidoreductase chain I-like protein |
|---|
| Protein accession | YP_003143711 |
|---|
| Protein GI | 257064039 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGAAGTT TCAAACTCGG CAAGATGACC ATGCGGTCGT TGTTCGGAAC GCCGGAAACT
GTTCTGTATC CTGTCGTTGA GCCTAAGCGC CATGCGAACA CCCGCGGTCA CATTGAAAAC
CATGCCCCGC AGGACTGCAT CCTGTGCGGC ATCTGCATGA AGAAATGCCC GGCGAACGCC
ATCGTCGTCA GCAAGCCTGA ACGCACTTGG ACTATCGACC CGTTCCGCTG CATCAGATGC
AACGAATGCG CCATCGCATG TCCGAAGCAA TGCTTGAGCA TGCATATGGA AAAATCGGAC
GCTTCCAAGG AACATGCGGC AACTGTCGTG GAGATTCCCG AATCCGAGAA GGATCGTGAG
AAGCGGCTGG CCGCCGAAGC GCGCAAGGCT GAGGCCGCCA AGGCTGCACC GGCCACTGCT
CCTGCTGCAT CTGCTGACGA AAGCGTTCAG CTGTCGCCCG AGATGGAGGC GAAGATTGCT
GCAATGCCGC CTGAGAAGGC AGCCAAGTTC CGTGCAGCCT GCATCGCCAA AGCCAAAAAG
GAACAGGCCG CCGCGGCGCC TGCTGCCGCA TCGGACGAGG TCGAAGTGGT GTTCCCCGAG
CATGTGGCCG CTAAGCTGGC CAACATGTCC CCTGAGAAGG TGGAGAAGTT CCGCGCAGCT
TGGATCGCAA AGAAGATGGG TGGGGGAGCC GGTGCAGAGC CTGCCTCCAA GCCGGAACCT
GCTGCGGACA AGCCGGCTGC AGCGCCTGTT CAGAAGGTTG CGGTGCCGGA GCTGCCAGCC
GAACCGAAGG AGCTGCGCGT GCCGCGCGAC CTTGAGGAGA AGCTGAAGCT CCTCGATCCG
GAGAAAGCGG AGAAGTTCCG CTCGGCCTGG TTGGCGAAAG CAAAGAGGGA CGCCGGTTTG
TAA
|
|---|
| Protein sequence | MGSFKLGKMT MRSLFGTPET VLYPVVEPKR HANTRGHIEN HAPQDCILCG ICMKKCPANA
IVVSKPERTW TIDPFRCIRC NECAIACPKQ CLSMHMEKSD ASKEHAATVV EIPESEKDRE
KRLAAEARKA EAAKAAPATA PAASADESVQ LSPEMEAKIA AMPPEKAAKF RAACIAKAKK
EQAAAAPAAA SDEVEVVFPE HVAAKLANMS PEKVEKFRAA WIAKKMGGGA GAEPASKPEP
AADKPAAAPV QKVAVPELPA EPKELRVPRD LEEKLKLLDP EKAEKFRSAW LAKAKRDAGL
|
|---|
| |