Gene Shel_09460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_09460 
Symbol 
ID8394837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1091724 
End bp1092035 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content52% 
IMG OID644985705 
Productregulator of competence-specific genes 
Protein accessionYP_003143335 
Protein GI257063663 
COG category[K] Transcription 
COG ID[COG3070] Regulator of competence-specific genes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0963603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCGA GTAAAGAGTA TCTGGATTAC ATATTGGAGC AGCTTTCCGA CTTGGAAGAC 
GTATCCTGCC GCGCCATGAT GGGCGAATAT ATCATCTACT ACCGGGGCAA GGTCATCGGC
GGCATTTACG ACGACCGCTT TCTGGTGAAG CCCACGAAGT CAGCGCAGGC GATGATGCCG
GATGCGGAGA TGGAGCTTCC CTATGAGGGC GCGAAGGATA TGCTTCTTGT TGATGGTGTC
GAAAACCGGG AGTTCTTGGA AGAACTGCTG AAAGCAATGT ATGTGGAACT CCCTGCTCCG
AAGAAGAAAT GA
 
Protein sequence
MASSKEYLDY ILEQLSDLED VSCRAMMGEY IIYYRGKVIG GIYDDRFLVK PTKSAQAMMP 
DAEMELPYEG AKDMLLVDGV ENREFLEELL KAMYVELPAP KKK