Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_09460 |
Symbol | |
ID | 8394837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1091724 |
End bp | 1092035 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644985705 |
Product | regulator of competence-specific genes |
Protein accession | YP_003143335 |
Protein GI | 257063663 |
COG category | [K] Transcription |
COG ID | [COG3070] Regulator of competence-specific genes |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0963603 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATCGA GTAAAGAGTA TCTGGATTAC ATATTGGAGC AGCTTTCCGA CTTGGAAGAC GTATCCTGCC GCGCCATGAT GGGCGAATAT ATCATCTACT ACCGGGGCAA GGTCATCGGC GGCATTTACG ACGACCGCTT TCTGGTGAAG CCCACGAAGT CAGCGCAGGC GATGATGCCG GATGCGGAGA TGGAGCTTCC CTATGAGGGC GCGAAGGATA TGCTTCTTGT TGATGGTGTC GAAAACCGGG AGTTCTTGGA AGAACTGCTG AAAGCAATGT ATGTGGAACT CCCTGCTCCG AAGAAGAAAT GA
|
Protein sequence | MASSKEYLDY ILEQLSDLED VSCRAMMGEY IIYYRGKVIG GIYDDRFLVK PTKSAQAMMP DAEMELPYEG AKDMLLVDGV ENREFLEELL KAMYVELPAP KKK
|
| |