| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_08190 |
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| Symbol | |
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| ID | 8394710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 950917 |
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| End bp | 952557 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985579 |
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| Product | phage terminase-like protein, large subunit |
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| Protein accession | YP_003143224 |
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| Protein GI | 257063552 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4626] Phage terminase-like protein, large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.038355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000322264 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCCC GCGATTACAT CACCGAATAC TGGCACGCCA TAGAGTCGGG CGCGGTCACG
GTATGCGAGA AGACCCGCAA GGCTTACGAA CGGCTGGCCT ACGAGGTCGA GAACGGGCGC
GGGCGCTGGG TTTTCGACGT GGAGAAGGGC AACCGCCCGA TTGAGTTTAT GCGCCGTTTC
TGCCGCCACT CTAAAGGCGA GTGGGCGGGC AAGCCCCTTG AGTTGGAGCT GTGGCAGAAG
GCTTTCGTGT GCGCCCTGTT CGGCTTCGTT GACAAGGACA CGGGCGAGCG GCGCTTTAAC
GAGGCGCTTC TGTGCATTTC ACGCAAGGGG GGCAAAAGTA CGCTTGCCGC CGGCATCCTT
CTCTATCTGC TGACCGCTGA CGGCGAACCG GGCGCGGAGG TGTACACCGT GGCCACCAAG
CTTGACCAAG CCAAGCTGAT ATTCGACGAG GCCGCGCATA TGGTCGAGCA GTCGCCGACA
CTCGCGAAGC GGATAAAGAA GCGCCGTACC GACCTCTACT TTGCTGGTCA AATGTCGAAA
ATGCAGCCGT TGGGCAAGAA CTCCAACACG CTTGACGGCC TGAACGCTAG CGCCGTCTGC
ATCGACGAGC TGCACGGCAT CACAGATCGC AACTTGTACG AGGTAATGAA ACAGTCCATG
AGCACGAGGC GGCAACCGCT CTTGCTGATG ACCACGACGG CGGGTTTCGT CCGCGAATGC
ATCTTTGATG ACATGTACGA GTACGCCGAG AAGGTTCTCA ACGGGGTTAT CGAAGACGAA
CGTTTCCTTG CCGTCGTGTA CGAACTGGAT ACGGTCGAGG AATGGAAGGA CGAAAAAGCC
TGGTACAAGG CCAACCCGTC GCTTGGGACG GTCAAAAAGC TGGACGACCT ACGCGCAAAG
GTCGAGCGTG CGAAGAACTC ACCCAACGAC CTTAACGGTA TCTTGTGCAA GGACTTCAAC
GTTCGCAACA CGAGCGCGGG CGCGTGGCTG ACCTTCGATG ACCTGAACAA TACGGCCACC
TTCGACCTAT CCGACTTCAA AGGCTGCTGG GCTATCGGCG GCGCTGACCT GTCGATCACA
ACCGACCTGA CGGCGGCAAC GCTGCTCATG CACCGCGACG GGCTTTTCTA CGTCACCCAG
ATGTACTGGA TACCCGAAGC GAACCTTGAG AAGCGGGTAA GGGATGACAA GATACCCTAT
GACAAGTGGC GCGAACGTGG GCTTCTGCGC CTGTGCCACG GTAACACGAT TGACTACGGC
GATGTTACAG CATGGTTCTT GGAAATGGTC GAGTTCGGCA TCACGCCCGC CTGGATCTAC
TACGACAGCT ATAGCGCCCG CTACTGGGTA GACGAGATGC AGCGCCACGG TTTCAGGATG
GAGCGCACCA TACAAGGAGC CAAAACGCTT TCGTTGCCGA TGCAGCGGCT AGGGGCTGAC
CTGCAAGCCA AGCGGATCAA CTACAACAAC AGCCCGATTC TCAAATGGTG CATTAGCAAC
ACGGCCATCG AAACCGACCG CAACGGGAAC ATCGTACCCG TGAAGAACCA GAAGCCCCGG
CAGCGAATCG ACGGGCTGGC GAGCCTGCTG GATGCGTATG TCGGCCTAAA CGACCACTAC
AACGAGTTTT GCGACCTGTA A
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| Protein sequence | MSARDYITEY WHAIESGAVT VCEKTRKAYE RLAYEVENGR GRWVFDVEKG NRPIEFMRRF
CRHSKGEWAG KPLELELWQK AFVCALFGFV DKDTGERRFN EALLCISRKG GKSTLAAGIL
LYLLTADGEP GAEVYTVATK LDQAKLIFDE AAHMVEQSPT LAKRIKKRRT DLYFAGQMSK
MQPLGKNSNT LDGLNASAVC IDELHGITDR NLYEVMKQSM STRRQPLLLM TTTAGFVREC
IFDDMYEYAE KVLNGVIEDE RFLAVVYELD TVEEWKDEKA WYKANPSLGT VKKLDDLRAK
VERAKNSPND LNGILCKDFN VRNTSAGAWL TFDDLNNTAT FDLSDFKGCW AIGGADLSIT
TDLTAATLLM HRDGLFYVTQ MYWIPEANLE KRVRDDKIPY DKWRERGLLR LCHGNTIDYG
DVTAWFLEMV EFGITPAWIY YDSYSARYWV DEMQRHGFRM ERTIQGAKTL SLPMQRLGAD
LQAKRINYNN SPILKWCISN TAIETDRNGN IVPVKNQKPR QRIDGLASLL DAYVGLNDHY
NEFCDL
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