Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_08070 |
Symbol | |
ID | 8394698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 935117 |
End bp | 936346 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985567 |
Product | glycopeptide antibiotics resistance protein |
Protein accession | YP_003143212 |
Protein GI | 257063540 |
COG category | [V] Defense mechanisms |
COG ID | [COG4767] Glycopeptide antibiotics resistance protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000781002 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTCGTCCT ACGTTGCATC CATCAGTTTT TCGGTGTTCA GCTTCCCGCT GGTCGCAGCT TTGTGCACGT TGCCGTACAT GGTGTATCAG TACCGCCGCT ACGGTCGCGT GCCGGTGTGG AAGTCCTTCG TCGTATTCTT GTTCATATTC TATATAACCA CGGCGTATTA CCTGGTCATC ATGCCGCTGC CGGAAAGCCG CGATGCCGTG GTGGCGGGGG CACGCATCCC GAACCTCGAA TTGTTCCGGT TCGTGCGCCG CATAGCCGCC CAAGCCGGAT TCAGCATGAC AGACCCATCT TCATGGGTTG CGACGCTGAT GATCCCCGAT GTGTACGAGG CCCTGTTCAA CGTGTTTTTG ACGGTGCCTT TCGGCATCTT CATGAAATAC TTCTTCGGCT GCCGCTGGTG GCAGGCGCTC GTGTCGGGCT TGGCCTTGTC GCTGTTTTTC GAAACGTCCC AGTTGACAGG CCTATGGGGA TGGTATGCGC ACCCGTACAG GCTTTTCGAC GTGGACGACC TGCTGATCAA CACCACAGGG GCCATGCTGG GCTTCTGGCT GGCGTTTCCT CTGACGTGGC ACCTGCCCGA CATCGACGAC ATGAACGAGG AGTCGCTGCG CCAAAGCGCG TCGTTTACTA CGTTCACGCG CCGACTCTGG GCGTTTGCCA TCGATGTTGC GCTTTGCTCC GGGGCCTTCG CCGTTTGGAC CGTGGCGAAA CCGACGGTGC CGAACCCCGA GGCTGGCGAT CTTGCCGCTC TGCTGGTCAT AACAGGAATC GTCTTCGTGC TGGCTCCGGC TTTGGCCGAT CATGCGACGT TTGGGCAGCG TCTGCTGGAG CTGCGCATTG TGGGGCCCGA TGGCGGCCGC ACCCGATGGT ATCGTGCTTG CGGACGCTAC ATCCTGCTCA TCTGGGTGTT TCTCATGCTG CCTGCCTGGG CGTTCGTCCT TCTGCCACGC ACCATCGAAG GCGTGCCCGT CAATTCCTCT TTGGTTGCAT CGGTCTTGGC GACGGTGTAT GGAACGTGGC TGCTGACGGT GGCGGTGCGG GCGATCCGCT CGGCGAGGCG CCATCCTTTC GTCATGCTCA ACGGCATCCT GACAGACACG CGCATCATGT CGCTCGAGCA GATCAGCGCA TTGCGTGGGG CGGACGCGGC TGGCTATTTC GTCAGCAACG ATGCGAGTAC GTCGGAAACC TCGGCGAACG AGACGGCGGA TTCTGAGTAG
|
Protein sequence | MSSYVASISF SVFSFPLVAA LCTLPYMVYQ YRRYGRVPVW KSFVVFLFIF YITTAYYLVI MPLPESRDAV VAGARIPNLE LFRFVRRIAA QAGFSMTDPS SWVATLMIPD VYEALFNVFL TVPFGIFMKY FFGCRWWQAL VSGLALSLFF ETSQLTGLWG WYAHPYRLFD VDDLLINTTG AMLGFWLAFP LTWHLPDIDD MNEESLRQSA SFTTFTRRLW AFAIDVALCS GAFAVWTVAK PTVPNPEAGD LAALLVITGI VFVLAPALAD HATFGQRLLE LRIVGPDGGR TRWYRACGRY ILLIWVFLML PAWAFVLLPR TIEGVPVNSS LVASVLATVY GTWLLTVAVR AIRSARRHPF VMLNGILTDT RIMSLEQISA LRGADAAGYF VSNDASTSET SANETADSE
|
| |