Gene Shel_06180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_06180 
Symbol 
ID8394510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp722744 
End bp723643 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID644985380 
Productpolyferredoxin 
Protein accessionYP_003143026 
Protein GI257063354 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.91995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TGAAGACGTC GACCCTTCGC GGTTTGGTGG TGTTGGCCGT CACGCTGGTC 
ATCGCGGTGG GATACTTCAC CCATATGGGT ATCGGAAACC TGAGCGGATT CGGGTTCGAC
GTGTTCTCCG TGCTGTGTCC TTTGGGCTAT CTGGAAAGCC TGCTTGCCAG CAGGACCTTC
GTTCCGCGCG CGCTTATCTC GTTTGTCGGC GTGTGCGTGC TCGTGCTGCT GCTGGGCCGC
GTGTTCTGCG CGTGGATCTG CCCCATGCCG CAGCTGCAGC GCTTCATCCC CGGATTCAAG
GCGAAGCAGA AAGCCCAGGC GGCCGCCGAG GCCCATGCGG CCCGCGCCGA CCTGGCATCC
GACCCGTCCG CCAAACCGAA CCGATTCAAG CTGGATTCCC GTTTCGGCGT GCTGGTCGGG
GCTTTGGCAT CTGCGGCCAT CTTCGGATTC CCCGTGTTCT GCCTCGTATG CCCTGTGGGC
CTGACCTTCG CAACGGTGTA TCTCGTCATG CGCCTGTTCG CTTTCGGCGA AGTGACCTGG
ACCGTCATTG CGGTGCCGTT GGTGCTGCTG GTCGAGGTCG TGTTCTTCCG CACCTGGTGC
TCGAAGTTCT GCCCGCTGGG CGCTCTCATG TCGCTGCTTT CGGCCGGCAA CCGCACCCTG
CGTCCCACCA TTGACGACAA GGCGTGCCTG CATGCATCAA AGGGCGTGAA ATGCTTCGCC
TGCTCGAAGG CATGTCCGCA GCACATCGAC ATCCGCAGGC CCGATATCTC CGAAGCGGCG
CTGAGCGATT GCACCAAGTG CCGCGAGTGC GCGGACCATT GCCCGGCGCA CGCCATTACC
TTCCCGATCC TGCCGCAATC GCAGGGGACC GTCGAGGCGA AAGCCGAGGT CAAGCACTAA
 
Protein sequence
MKKMKTSTLR GLVVLAVTLV IAVGYFTHMG IGNLSGFGFD VFSVLCPLGY LESLLASRTF 
VPRALISFVG VCVLVLLLGR VFCAWICPMP QLQRFIPGFK AKQKAQAAAE AHAARADLAS
DPSAKPNRFK LDSRFGVLVG ALASAAIFGF PVFCLVCPVG LTFATVYLVM RLFAFGEVTW
TVIAVPLVLL VEVVFFRTWC SKFCPLGALM SLLSAGNRTL RPTIDDKACL HASKGVKCFA
CSKACPQHID IRRPDISEAA LSDCTKCREC ADHCPAHAIT FPILPQSQGT VEAKAEVKH